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Pseudomonas bubulae sp. nov., isolated from beef.

Lick S, Kröckel L, Wibberg D, Winkler A, Blom J, Goesmann A, Kalinowski J.

Int J Syst Evol Microbiol. 2019 Oct 17. doi: 10.1099/ijsem.0.003751. [Epub ahead of print]


Comparative genomic analyses reveal diverse virulence factors and antimicrobial resistance mechanisms in clinical Elizabethkingia meningoseptica strains.

Chen S, Soehnlen M, Blom J, Terrapon N, Henrissat B, Walker ED.

PLoS One. 2019 Oct 10;14(10):e0222648. doi: 10.1371/journal.pone.0222648. eCollection 2019.


Umpolung Strategy for α-Functionalization of Aldehydes for the Addition of Thiols and other Nucleophiles.

Blom J, Reyes-Rodríguez GJ, Tobiesen HN, Lamhauge JN, Iversen MV, Barløse CL, Hammer N, Rusbjerg M, Jørgensen KA.

Angew Chem Int Ed Engl. 2019 Oct 9. doi: 10.1002/anie.201911793. [Epub ahead of print] Review.


Complete Genome Sequence of the Plant Growth-Promoting Bacterium Hartmannibacter diazotrophicus Strain E19T.

Suarez C, Ratering S, Hain T, Fritzenwanker M, Goesmann A, Blom J, Chakraborty T, Bunk B, Spröer C, Overmann J, Schnell S.

Int J Genomics. 2019 Sep 9;2019:7586430. doi: 10.1155/2019/7586430. eCollection 2019.


Updated Genome Sequence and Annotation for the Full Genome of Pseudomonas protegens CHA0.

Smits THM, Rezzonico F, Frasson D, Vesga P, Vacheron J, Blom J, Pothier JF, Keel C, Maurhofer M, Sievers M.

Microbiol Resour Announc. 2019 Sep 26;8(39). pii: e01002-19. doi: 10.1128/MRA.01002-19.


Health-related preferences of older patients with multimorbidity: the protocol for an evidence map.

González-González AI GONZALEZ, Schmucker C, Blom J, van den Akker M, Nguyen TS, Nothacker J, Meerpohl JJ, Röttger K, Wegwarth O, Hoffmann T, Straus SE, Gerlach FM, Muth C.

BMJ Open. 2019 Sep 3;9(9):e029724. doi: 10.1136/bmjopen-2019-029724.


Comparative genomics of Aeromonas veronii: Identification of a pathotype impacting aquaculture globally.

Tekedar HC, Kumru S, Blom J, Perkins AD, Griffin MJ, Abdelhamed H, Karsi A, Lawrence ML.

PLoS One. 2019 Aug 29;14(8):e0221018. doi: 10.1371/journal.pone.0221018. eCollection 2019.


Reclassification of Micrococcus aloeverae and Micrococcus yunnanensis as later heterotypic synonyms of Micrococcus luteus.

Huang CH, Wang CL, Liou JS, Lee AY, Blom J, Huang L, Watanabe K.

Int J Syst Evol Microbiol. 2019 Nov;69(11):3512-3518. doi: 10.1099/ijsem.0.003654.


Complete Genome Sequence of Weissella hellenica 0916-4-2 and Its Comparative Genomic Analysis.

Panthee S, Paudel A, Blom J, Hamamoto H, Sekimizu K.

Front Microbiol. 2019 Jul 24;10:1619. doi: 10.3389/fmicb.2019.01619. eCollection 2019.


Frankia-Enriched Metagenomes from the Earliest Diverging Symbiotic Frankia Cluster: They Come in Teams.

Nguyen TV, Wibberg D, Vigil-Stenman T, Berckx F, Battenberg K, Demchenko KN, Blom J, Fernandez MP, Yamanaka T, Berry AM, Kalinowski J, Brachmann A, Pawlowski K.

Genome Biol Evol. 2019 Aug 1;11(8):2273-2291. doi: 10.1093/gbe/evz153.


Comparative genomics reveals complex natural product biosynthesis capacities and carbon metabolism across host-associated and free-living Aquimarina (Bacteroidetes, Flavobacteriaceae) species.

Silva SG, Blom J, Keller-Costa T, Costa R.

Environ Microbiol. 2019 Nov;21(11):4002-4019. doi: 10.1111/1462-2920.14747. Epub 2019 Aug 5.


Genomic analysis of a novel Rhodococcus (Prescottella) equi isolate from a bovine host.

Paterson ML, Ranasinghe D, Blom J, Dover LG, Sutcliffe IC, Lopes B, Sangal V.

Arch Microbiol. 2019 Nov;201(9):1317-1321. doi: 10.1007/s00203-019-01695-z. Epub 2019 Jul 13.


Cold-adapted Bacilli isolated from the Qinghai-Tibetan Plateau are able to promote plant growth in extreme environments.

Wu H, Gu Q, Xie Y, Lou Z, Xue P, Fang L, Yu C, Jia D, Huang G, Zhu B, Schneider A, Blom J, Lasch P, Borriss R, Gao X.

Environ Microbiol. 2019 Jun 24. doi: 10.1111/1462-2920.14722. [Epub ahead of print]


Codon Usage Heterogeneity in the Multipartite Prokaryote Genome: Selection-Based Coding Bias Associated with Gene Location, Expression Level, and Ancestry.

López JL, Lozano MJ, Lagares A Jr, Fabre ML, Draghi WO, Del Papa MF, Pistorio M, Becker A, Wibberg D, Schlüter A, Pühler A, Blom J, Goesmann A, Lagares A.

MBio. 2019 May 28;10(3). pii: e00505-19. doi: 10.1128/mBio.00505-19.


Comparative Genomics of the Genus Methanohalophilus, Including a Newly Isolated Strain From Kebrit Deep in the Red Sea.

Guan Y, Ngugi DK, Vinu M, Blom J, Alam I, Guillot S, Ferry JG, Stingl U.

Front Microbiol. 2019 Apr 24;10:839. doi: 10.3389/fmicb.2019.00839. eCollection 2019.


Genomic analysis of a novel nontoxigenic Corynebacterium diphtheriae strain isolated from a cancer patient.

Ramdhan ND, Blom J, Sutcliffe IC, Pereira-Ribeiro PMA, Santos CS, Mattos-Guaraldi AL, Burkovski A, Sangal V.

New Microbes New Infect. 2019 Apr 9;30:100544. doi: 10.1016/j.nmni.2019.100544. eCollection 2019 Jul.


Metagenomics-Guided Survey, Isolation, and Characterization of Uranium Resistant Microbiota from the Savannah River Site, USA.

Jaswal R, Pathak A, Edwards B III, Lewis R III, Seaman JC, Stothard P, Krivushin K, Blom J, Rupp O, Chauhan A.

Genes (Basel). 2019 Apr 28;10(5). pii: E325. doi: 10.3390/genes10050325.


Genome-informed Bradyrhizobium taxonomy: where to from here?

Avontuur JR, Palmer M, Beukes CW, Chan WY, Coetzee MPA, Blom J, Stępkowski T, Kyrpides NC, Woyke T, Shapiro N, Whitman WB, Venter SN, Steenkamp ET.

Syst Appl Microbiol. 2019 Jul;42(4):427-439. doi: 10.1016/j.syapm.2019.03.006. Epub 2019 Apr 4.


The synergistic effect of concatenation in phylogenomics: the case in Pantoea.

Palmer M, Venter SN, McTaggart AR, Coetzee MPA, Van Wyk S, Avontuur JR, Beukes CW, Fourie G, Santana QC, Van Der Nest MA, Blom J, Steenkamp ET.

PeerJ. 2019 Apr 16;7:e6698. doi: 10.7717/peerj.6698. eCollection 2019.


Complete Genome Sequence of the Corallopyronin A-Producing Myxobacterium Corallococcus coralloides B035.

Bouhired S, Rupp O, Blom J, Schäberle TF, Schiefer A, Kehraus S, Pfarr K, Goesmann A, Hoerauf A, König G.

Microbiol Resour Announc. 2019 Apr 25;8(17). pii: e00050-19. doi: 10.1128/MRA.00050-19.

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