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Items: 11

1.

DiffCorr: an R package to analyze and visualize differential correlations in biological networks.

Fukushima A.

Gene. 2013 Apr 10;518(1):209-14. doi: 10.1016/j.gene.2012.11.028. Epub 2012 Dec 13.

2.

Platforms for biomarker analysis using high-throughput approaches in genomics, transcriptomics, proteomics, metabolomics, and bioinformatics.

Merrick BA, London RE, Bushel PR, Grissom SF, Paules RS.

IARC Sci Publ. 2011;(163):121-42. Review.

PMID:
22997859
3.

Integrating multiple 'omics' analysis for microbial biology: application and methodologies.

Zhang W, Li F, Nie L.

Microbiology. 2010 Feb;156(Pt 2):287-301. doi: 10.1099/mic.0.034793-0. Epub 2009 Nov 12. Review.

PMID:
19910409
4.

Decoding genes with coexpression networks and metabolomics - 'majority report by precogs'.

Saito K, Hirai MY, Yonekura-Sakakibara K.

Trends Plant Sci. 2008 Jan;13(1):36-43. Epub 2007 Dec 21. Review.

PMID:
18160330
5.

Systems biology approaches and pathway tools for investigating cardiovascular disease.

Wheelock CE, Wheelock AM, Kawashima S, Diez D, Kanehisa M, van Erk M, Kleemann R, Haeggström JZ, Goto S.

Mol Biosyst. 2009 Jun;5(6):588-602. doi: 10.1039/b902356a. Epub 2009 Apr 27. Review.

PMID:
19462016
6.

A survey on computational approaches to identifying disease biomarkers based on molecular networks.

Qin G, Zhao XM.

J Theor Biol. 2014 Dec 7;362:9-16. doi: 10.1016/j.jtbi.2014.06.007. Epub 2014 Jun 12. Review.

PMID:
24931674
7.

Metabolomics.

Gomase VS, Changbhale SS, Patil SA, Kale KV.

Curr Drug Metab. 2008 Jan;9(1):89-98. Review.

PMID:
18220576
8.

Metabolomics in epidemiology: from metabolite concentrations to integrative reaction networks.

Fearnley LG, Inouye M.

Int J Epidemiol. 2016 Oct;45(5):1319-1328. Epub 2016 Apr 26. Review.

9.

Differential network analysis in human cancer research.

Gill R, Datta S, Datta S.

Curr Pharm Des. 2014;20(1):4-10. Review.

10.

Network-based identification of biomarkers coexpressed with multiple pathways.

Guo NL, Wan YW.

Cancer Inform. 2014 Oct 16;13(Suppl 5):37-47. doi: 10.4137/CIN.S14054. eCollection 2014. Review.

11.

Using gene networks in EvoDevo analyses.

Sinha NR, Rowland SD, Ichihashi Y.

Curr Opin Plant Biol. 2016 Oct;33:133-139. doi: 10.1016/j.pbi.2016.06.016. Epub 2016 Jul 22. Review.

PMID:
27455887

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