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Items: 1 to 20 of 31

1.

The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments.

Ingolia NT, Brar GA, Rouskin S, McGeachy AM, Weissman JS.

Nat Protoc. 2012 Jul 26;7(8):1534-50. doi: 10.1038/nprot.2012.086.

2.

Ribosome profiling reveals the what, when, where and how of protein synthesis.

Brar GA, Weissman JS.

Nat Rev Mol Cell Biol. 2015 Nov;16(11):651-64. doi: 10.1038/nrm4069. Epub 2015 Oct 14. Review.

3.

Translation Analysis at the Genome Scale by Ribosome Profiling.

Baudin-Baillieu A, Hatin I, Legendre R, Namy O.

Methods Mol Biol. 2016;1361:105-24. doi: 10.1007/978-1-4939-3079-1_7. Review.

PMID:
26483019
4.

Ribosome profiling: a Hi-Def monitor for protein synthesis at the genome-wide scale.

Michel AM, Baranov PV.

Wiley Interdiscip Rev RNA. 2013 Sep-Oct;4(5):473-90. doi: 10.1002/wrna.1172. Epub 2013 May 20. Review. Erratum in: Wiley Interdiscip Rev RNA. 2017 Sep;8(5):.

5.

Insights into the mechanisms of eukaryotic translation gained with ribosome profiling.

Andreev DE, O'Connor PB, Loughran G, Dmitriev SE, Baranov PV, Shatsky IN.

Nucleic Acids Res. 2017 Jan 25;45(2):513-526. doi: 10.1093/nar/gkw1190. Epub 2016 Dec 6. Review.

6.

Ribosomal profiling adds new coding sequences to the proteome.

Mumtaz MA, Couso JP.

Biochem Soc Trans. 2015 Dec;43(6):1271-6. doi: 10.1042/BST20150170. Review.

PMID:
26614672
7.

Mapping the non-standardized biases of ribosome profiling.

Bartholomäus A, Del Campo C, Ignatova Z.

Biol Chem. 2016 Jan;397(1):23-35. doi: 10.1515/hsz-2015-0197. Review.

PMID:
26351919
8.

Selective mRNA translation in erythropoiesis.

Thiadens KA, von Lindern M.

Biochem Soc Trans. 2015 Jun;43(3):343-7. doi: 10.1042/BST20150009. Review.

PMID:
26009174
9.

Ribosome profiling: new views of translation, from single codons to genome scale.

Ingolia NT.

Nat Rev Genet. 2014 Mar;15(3):205-13. doi: 10.1038/nrg3645. Epub 2014 Jan 28. Review.

PMID:
24468696
10.

Translatome profiling: methods for genome-scale analysis of mRNA translation.

King HA, Gerber AP.

Brief Funct Genomics. 2016 Jan;15(1):22-31. doi: 10.1093/bfgp/elu045. Epub 2014 Nov 6. Review.

PMID:
25380596
11.

Probing dimensionality beyond the linear sequence of mRNA.

Del Campo C, Ignatova Z.

Curr Genet. 2016 May;62(2):331-4. doi: 10.1007/s00294-015-0551-5. Epub 2015 Dec 9. Review.

PMID:
26650615
12.

The ribosome filter redux.

Mauro VP, Edelman GM.

Cell Cycle. 2007 Sep 15;6(18):2246-51. Epub 2007 Jun 29. Review.

13.

Specialized ribosomes: a new frontier in gene regulation and organismal biology.

Xue S, Barna M.

Nat Rev Mol Cell Biol. 2012 May 23;13(6):355-69. doi: 10.1038/nrm3359. Review.

14.

Illuminating Parasite Protein Production by Ribosome Profiling.

Parsons M, Myler PJ.

Trends Parasitol. 2016 Jun;32(6):446-457. doi: 10.1016/j.pt.2016.03.005. Epub 2016 Apr 6. Review.

15.

[Ribosome as a hub for protein and mRNA quality control and gene regulation].

Inada T.

Seikagaku. 2013 Oct;85(10):932-7. Review. Japanese. No abstract available.

PMID:
24392593
16.

RNA sequencing: from tag-based profiling to resolving complete transcript structure.

de Klerk E, den Dunnen JT, 't Hoen PA.

Cell Mol Life Sci. 2014 Sep;71(18):3537-51. doi: 10.1007/s00018-014-1637-9. Epub 2014 May 15. Review.

17.

The frontier of RNA metamorphosis and ribosome signature in neocortical development.

Kraushar ML, Popovitchenko T, Volk NL, Rasin MR.

Int J Dev Neurosci. 2016 Dec;55:131-139. doi: 10.1016/j.ijdevneu.2016.02.003. Epub 2016 May 27. Review.

18.

Identification of Small Novel Coding Sequences, a Proteogenomics Endeavor.

Olexiouk V, Menschaert G.

Adv Exp Med Biol. 2016;926:49-64. Review.

PMID:
27686805
19.

Eyes on Translation.

Chekulaeva M, Landthaler M.

Mol Cell. 2016 Sep 15;63(6):918-25. doi: 10.1016/j.molcel.2016.08.031. Review.

20.

Ribosome profiling and dynamic regulation of translation in mammals.

Gobet C, Naef F.

Curr Opin Genet Dev. 2017 Apr;43:120-127. doi: 10.1016/j.gde.2017.03.005. Epub 2017 Mar 28. Review.

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