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Items: 19

1.

Domain landscapes of somatic mutations in cancer.

Nehrt NL, Peterson TA, Park D, Kann MG.

BMC Genomics. 2012 Jun 18;13 Suppl 4:S9. doi: 10.1186/1471-2164-13-S4-S9.

2.

Whole-exome sequencing reveals recurrent somatic mutation networks in cancer.

Liu X, Wang J, Chen L.

Cancer Lett. 2013 Nov 1;340(2):270-6. doi: 10.1016/j.canlet.2012.11.002. Epub 2012 Nov 12. Review.

PMID:
23153794
3.

[Current topics in mutations in the cancer genome].

Iwaya T, Mimori K, Wakabayashi G.

Nihon Geka Gakkai Zasshi. 2012 Mar;113(2):185-90. Review. Japanese.

PMID:
22582578
4.

Combinatorial patterns of somatic gene mutations in cancer.

Yeang CH, McCormick F, Levine A.

FASEB J. 2008 Aug;22(8):2605-22. doi: 10.1096/fj.08-108985. Epub 2008 Apr 23. Review.

PMID:
18434431
5.

Identifying driver mutations from sequencing data of heterogeneous tumors in the era of personalized genome sequencing.

Zhang J, Liu J, Sun J, Chen C, Foltz G, Lin B.

Brief Bioinform. 2014 Mar;15(2):244-55. doi: 10.1093/bib/bbt042. Epub 2013 Jul 1. Review.

PMID:
23818492
6.

Molecular pathways in tumor progression: from discovery to functional understanding.

Ali MA, Sjöblom T.

Mol Biosyst. 2009 Sep;5(9):902-8. doi: 10.1039/b903502h. Epub 2009 Jul 14. Review.

PMID:
19668850
7.

Beyond the exome: the role of non-coding somatic mutations in cancer.

Piraino SW, Furney SJ.

Ann Oncol. 2016 Feb;27(2):240-8. doi: 10.1093/annonc/mdv561. Epub 2015 Nov 23. Review.

PMID:
26598542
8.

Cancer driver mutations in protein kinase genes.

Torkamani A, Verkhivker G, Schork NJ.

Cancer Lett. 2009 Aug 28;281(2):117-27. doi: 10.1016/j.canlet.2008.11.008. Epub 2008 Dec 10. Review.

9.

Design and analysis issues in genome-wide somatic mutation studies of cancer.

Parmigiani G, Boca S, Lin J, Kinzler KW, Velculescu V, Vogelstein B.

Genomics. 2009 Jan;93(1):17-21. doi: 10.1016/j.ygeno.2008.07.005. Epub 2008 Aug 23. Review.

10.

Somatic mutations in cancer: Stochastic versus predictable.

Gold B.

Mutat Res. 2017 Feb;814:37-46. doi: 10.1016/j.mrgentox.2016.12.006. Epub 2017 Jan 7. Review.

PMID:
28137366
11.

Somatic TP53 Mutations in the Era of Genome Sequencing.

Hainaut P, Pfeifer GP.

Cold Spring Harb Perspect Med. 2016 Nov 1;6(11). pii: a026179. doi: 10.1101/cshperspect.a026179. Review.

PMID:
27503997
12.

Cancer genome landscapes.

Vogelstein B, Papadopoulos N, Velculescu VE, Zhou S, Diaz LA Jr, Kinzler KW.

Science. 2013 Mar 29;339(6127):1546-58. doi: 10.1126/science.1235122. Review.

13.

Somatic mutation in cancer and normal cells.

Martincorena I, Campbell PJ.

Science. 2015 Sep 25;349(6255):1483-9. doi: 10.1126/science.aab4082. Epub 2015 Sep 24. Review. Erratum in: Science. 2016 Mar 4;351(6277). pii: aaf5401. doi: 10.1126/science.aaf5401.

PMID:
26404825
14.

Identifying driver mutations in sequenced cancer genomes: computational approaches to enable precision medicine.

Raphael BJ, Dobson JR, Oesper L, Vandin F.

Genome Med. 2014 Jan 30;6(1):5. doi: 10.1186/gm524. eCollection 2014. Review.

15.

Do mutator mutations fuel tumorigenesis?

Fox EJ, Prindle MJ, Loeb LA.

Cancer Metastasis Rev. 2013 Dec;32(3-4):353-61. doi: 10.1007/s10555-013-9426-8. Review.

16.

Characterization of potential driver mutations involved in human breast cancer by computational approaches.

Rajendran BK, Deng CX.

Oncotarget. 2017 Apr 19. doi: 10.18632/oncotarget.17225. [Epub ahead of print] Review.

17.

Computational approaches for the identification of cancer genes and pathways.

Dimitrakopoulos CM, Beerenwinkel N.

Wiley Interdiscip Rev Syst Biol Med. 2017 Jan;9(1). doi: 10.1002/wsbm.1364. Epub 2016 Nov 11. Review.

18.

Modelling Mutation Spectra of Human Carcinogens Using Experimental Systems.

Zhivagui M, Korenjak M, Zavadil J.

Basic Clin Pharmacol Toxicol. 2016 Oct 18. doi: 10.1111/bcpt.12690. [Epub ahead of print] Review.

PMID:
27754614
19.

Identifying driver genes in cancer by triangulating gene expression, gene location, and survival data.

Rouam S, Miller LD, Karuturi RK.

Cancer Inform. 2015 Feb 3;13(Suppl 6):35-48. doi: 10.4137/CIN.S18302. eCollection 2014. Review.

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