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Items: 7

1.

Annotation of functional sites with the Conserved Domain Database.

Derbyshire MK, Lanczycki CJ, Bryant SH, Marchler-Bauer A.

Database (Oxford). 2012 Mar 20;2012:bar058. doi: 10.1093/database/bar058. Print 2012.

2.

Automatic annotation of protein function.

Valencia A.

Curr Opin Struct Biol. 2005 Jun;15(3):267-74. Review.

PMID:
15922590
3.

Protein function annotation using protein domain family resources.

Das S, Orengo CA.

Methods. 2016 Jan 15;93:24-34. doi: 10.1016/j.ymeth.2015.09.029. Epub 2015 Oct 3. Review.

PMID:
26434392
4.

Gene Ontology annotation of the rice blast fungus, Magnaporthe oryzae.

Meng S, Brown DE, Ebbole DJ, Torto-Alalibo T, Oh YY, Deng J, Mitchell TK, Dean RA.

BMC Microbiol. 2009 Feb 19;9 Suppl 1:S8. doi: 10.1186/1471-2180-9-S1-S8. Review.

5.

Protein structure annotation resources.

Gabanyi MJ, Berman HM.

Methods Mol Biol. 2015;1261:3-20. doi: 10.1007/978-1-4939-2230-7_1. Review.

6.

Accurate and scalable identification of functional sites by evolutionary tracing.

Lichtarge O, Yao H, Kristensen DM, Madabushi S, Mihalek I.

J Struct Funct Genomics. 2003;4(2-3):159-66. Review.

PMID:
14649300
7.

Comparative analysis of membrane protein structure databases.

Shimizu K, Cao W, Saad G, Shoji M, Terada T.

Biochim Biophys Acta. 2018 Jan 10;1860(5):1077-1091. doi: 10.1016/j.bbamem.2018.01.005. [Epub ahead of print] Review.

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