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The Mouse Genome Database (MGD): comprehensive resource for genetics and genomics of the laboratory mouse.

Eppig JT, Blake JA, Bult CJ, Kadin JA, Richardson JE; Mouse Genome Database Group.

Nucleic Acids Res. 2012 Jan;40(Database issue):D881-6. doi: 10.1093/nar/gkr974. Epub 2011 Nov 10.


Mouse Genome Database: From sequence to phenotypes and disease models.

Eppig JT, Richardson JE, Kadin JA, Smith CL, Blake JA, Bult CJ; MGD Team.

Genesis. 2015 Aug;53(8):458-73. doi: 10.1002/dvg.22874. Epub 2015 Jul 27. Review.


Orthology for comparative genomics in the mouse genome database.

Dolan ME, Baldarelli RM, Bello SM, Ni L, McAndrews MS, Bult CJ, Kadin JA, Richardson JE, Ringwald M, Eppig JT, Blake JA.

Mamm Genome. 2015 Aug;26(7-8):305-13. doi: 10.1007/s00335-015-9588-5. Epub 2015 Jul 30. Review.


Exploring human disease using the Rat Genome Database.

Shimoyama M, Laulederkind SJ, De Pons J, Nigam R, Smith JR, Tutaj M, Petri V, Hayman GT, Wang SJ, Ghiasvand O, Thota J, Dwinell MR.

Dis Model Mech. 2016 Oct 1;9(10):1089-1095. Review.


The mammalian phenotype ontology: enabling robust annotation and comparative analysis.

Smith CL, Eppig JT.

Wiley Interdiscip Rev Syst Biol Med. 2009 Nov-Dec;1(3):390-399. doi: 10.1002/wsbm.44. Review.


Gene Ontology annotation of the rice blast fungus, Magnaporthe oryzae.

Meng S, Brown DE, Ebbole DJ, Torto-Alalibo T, Oh YY, Deng J, Mitchell TK, Dean RA.

BMC Microbiol. 2009 Feb 19;9 Suppl 1:S8. doi: 10.1186/1471-2180-9-S1-S8. Review.


Bioinformatics resources for behavior studies in the laboratory mouse.

Bult CJ.

Int Rev Neurobiol. 2012;104:71-90. doi: 10.1016/B978-0-12-398323-7.00004-5. Review.


MalaCards: an amalgamated human disease compendium with diverse clinical and genetic annotation and structured search.

Rappaport N, Twik M, Plaschkes I, Nudel R, Iny Stein T, Levitt J, Gershoni M, Morrey CP, Safran M, Lancet D.

Nucleic Acids Res. 2017 Jan 4;45(D1):D877-D887. doi: 10.1093/nar/gkw1012. Epub 2016 Nov 28. Review.


The functional annotation of mammalian genomes: the challenge of phenotyping.

Brown SD, Wurst W, Kühn R, Hancock JM.

Annu Rev Genet. 2009;43:305-33. doi: 10.1146/annurev-genet-102108-134143. Review.


Mouse Genome Informatics (MGI): reflecting on 25 years.

Eppig JT, Richardson JE, Kadin JA, Ringwald M, Blake JA, Bult CJ.

Mamm Genome. 2015 Aug;26(7-8):272-84. doi: 10.1007/s00335-015-9589-4. Epub 2015 Aug 4. Review.


INFRAFRONTIER: a European resource for studying the functional basis of human disease.

Raess M, de Castro AA, Gailus-Durner V, Fessele S, Hrabě de Angelis M; INFRAFRONTIER Consortium.

Mamm Genome. 2016 Aug;27(7-8):445-50. doi: 10.1007/s00335-016-9642-y. Epub 2016 Jun 4. Review.


Searching Online Mendelian Inheritance in Man (OMIM): A Knowledgebase of Human Genes and Genetic Phenotypes.

Amberger JS, Hamosh A.

Curr Protoc Bioinformatics. 2017 Jun 27;58:1.2.1-1.2.12. doi: 10.1002/cpbi.27. Review.


A review of the new HGNC gene family resource.

Gray KA, Seal RL, Tweedie S, Wright MW, Bruford EA.

Hum Genomics. 2016 Feb 3;10:6. doi: 10.1186/s40246-016-0062-6. Review.


Model organism databases in behavioral neuroscience.

Shimoyama M, Smith JR, Hayman GT, Petri V, Nigam R.

Int Rev Neurobiol. 2012;104:25-46. doi: 10.1016/B978-0-12-398323-7.00002-1. Review.


Disease insights through cross-species phenotype comparisons.

Haendel MA, Vasilevsky N, Brush M, Hochheiser HS, Jacobsen J, Oellrich A, Mungall CJ, Washington N, Köhler S, Lewis SE, Robinson PN, Smedley D.

Mamm Genome. 2015 Oct;26(9-10):548-55. doi: 10.1007/s00335-015-9577-8. Epub 2015 Jun 20. Review.


Rat Genome and Model Resources.

Shimoyama M, Smith JR, Bryda E, Kuramoto T, Saba L, Dwinell M.

ILAR J. 2017 Jul 1;58(1):42-58. doi: 10.1093/ilar/ilw041. Review.


Databases of genomic variation and phenotypes: existing resources and future needs.

Johnston JJ, Biesecker LG.

Hum Mol Genet. 2013 Oct 15;22(R1):R27-31. doi: 10.1093/hmg/ddt384. Epub 2013 Aug 19. Review.


Mouse large-scale phenotyping initiatives: overview of the European Mouse Disease Clinic (EUMODIC) and of the Wellcome Trust Sanger Institute Mouse Genetics Project.

Ayadi A, Birling MC, Bottomley J, Bussell J, Fuchs H, Fray M, Gailus-Durner V, Greenaway S, Houghton R, Karp N, Leblanc S, Lengger C, Maier H, Mallon AM, Marschall S, Melvin D, Morgan H, Pavlovic G, Ryder E, Skarnes WC, Selloum M, Ramirez-Solis R, Sorg T, Teboul L, Vasseur L, Walling A, Weaver T, Wells S, White JK, Bradley A, Adams DJ, Steel KP, Hrabě de Angelis M, Brown SD, Herault Y.

Mamm Genome. 2012 Oct;23(9-10):600-10. doi: 10.1007/s00335-012-9418-y. Epub 2012 Sep 9. Review.


Phenobabelomics--mouse phenotype data resources.

Hancock JM, Mallon AM.

Brief Funct Genomic Proteomic. 2007 Dec;6(4):292-301. doi: 10.1093/bfgp/elm033. Epub 2008 Jan 11. Review.


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