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Items: 5

1.

Using MACS to identify peaks from ChIP-Seq data.

Feng J, Liu T, Zhang Y.

Curr Protoc Bioinformatics. 2011 Jun;Chapter 2:Unit 2.14. doi: 10.1002/0471250953.bi0214s34.

2.

[Processing and analysis of ChIP-seq data].

Gao S, Zhang N, Li B, Xu S, Ye YB, Ruan JS.

Yi Chuan. 2012 Jun;34(6):773-83. Review. Chinese.

PMID:
22698750
3.

Transcription Factor Binding Site Mapping Using ChIP-Seq.

Jaini S, Lyubetskaya A, Gomes A, Peterson M, Park ST, Raman S, Schoolnik G, Galagan J.

Microbiol Spectr. 2014 Apr;2(2). doi: 10.1128/microbiolspec.MGM2-0035-2013. Review.

PMID:
26105820
4.

ChIP-seq in studying epigenetic mechanisms of disease and promoting precision medicine: progresses and future directions.

Yan H, Tian S, Slager SL, Sun Z.

Epigenomics. 2016 Sep;8(9):1239-58. doi: 10.2217/epi-2016-0053. Epub 2016 Jun 20. Review.

PMID:
27319740
5.

A review of ensemble methods for de novo motif discovery in ChIP-Seq data.

Lihu A, Holban Ş.

Brief Bioinform. 2015 Nov;16(6):964-73. doi: 10.1093/bib/bbv022. Epub 2015 Apr 17. Review. Erratum in: Brief Bioinform. 2016 Jul;17(4):731.

PMID:
25888697

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