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Items: 1 to 20 of 29

1.

Computational refinement of post-translational modifications predicted from tandem mass spectrometry.

Chung C, Liu J, Emili A, Frey BJ.

Bioinformatics. 2011 Mar 15;27(6):797-806. doi: 10.1093/bioinformatics/btr017.

2.

Software eyes for protein post-translational modifications.

Na S, Paek E.

Mass Spectrom Rev. 2015 Mar-Apr;34(2):133-47. doi: 10.1002/mas.21425. Review.

PMID:
24889695
3.

Status of large-scale analysis of post-translational modifications by mass spectrometry.

Olsen JV, Mann M.

Mol Cell Proteomics. 2013 Dec;12(12):3444-52. doi: 10.1074/mcp.O113.034181. Review.

4.

Computational and statistical methods for high-throughput analysis of post-translational modifications of proteins.

Schwämmle V, Verano-Braga T, Roepstorff P.

J Proteomics. 2015 Nov 3;129:3-15. doi: 10.1016/j.jprot.2015.07.016. Review.

PMID:
26216596
5.
6.

Common errors in mass spectrometry-based analysis of post-translational modifications.

Kim MS, Zhong J, Pandey A.

Proteomics. 2016 Mar;16(5):700-14. doi: 10.1002/pmic.201500355. Review.

PMID:
26667783
7.

Post-translational modification of human heat shock factors and their functions: a recent update by proteomic approach.

Xu YM, Huang DY, Chiu JF, Lau AT.

J Proteome Res. 2012 May 4;11(5):2625-34. doi: 10.1021/pr201151a. Review.

PMID:
22494029
8.

Existing bioinformatics tools for the quantitation of post-translational modifications.

Allmer J.

Amino Acids. 2012 Jan;42(1):129-38. doi: 10.1007/s00726-010-0614-3. Review.

PMID:
20473535
9.

Modification site localization scoring: strategies and performance.

Chalkley RJ, Clauser KR.

Mol Cell Proteomics. 2012 May;11(5):3-14. doi: 10.1074/mcp.R111.015305. Review.

10.

[Post-translational modification (PTM) bioinformatics in China: progresses and perspectives].

Zexian L, Yudong C, Xuejiang G, Ao L, Tingting L, Jianding Q, Jian R, Shaoping S, Jiangning S, Minghui W, Lu X, Yu X, Ziding Z, Xingming Z.

Yi Chuan. 2015 Jul;37(7):621-34. doi: 10.16288/j.yczz.15-003. Review. Chinese.

PMID:
26351162
11.

The spectral networks paradigm in high throughput mass spectrometry.

Guthals A, Watrous JD, Dorrestein PC, Bandeira N.

Mol Biosyst. 2012 Oct;8(10):2535-44. doi: 10.1039/c2mb25085c. Review.

12.

Mass spectrometry-based detection and assignment of protein posttranslational modifications.

Doll S, Burlingame AL.

ACS Chem Biol. 2015 Jan 16;10(1):63-71. doi: 10.1021/cb500904b. Review.

13.

Proteomics of protein post-translational modifications implicated in neurodegeneration.

Ren RJ, Dammer EB, Wang G, Seyfried NT, Levey AI.

Transl Neurodegener. 2014 Oct 30;3(1):23. doi: 10.1186/2047-9158-3-23. Review.

14.

Evolution and functional cross-talk of protein post-translational modifications.

Beltrao P, Bork P, Krogan NJ, van Noort V.

Mol Syst Biol. 2013 Dec 22;9:714. doi: 10.1002/msb.201304521. Review.

15.

The use of proteases complementary to trypsin to probe isoforms and modifications.

Trevisiol S, Ayoub D, Lesur A, Ancheva L, Gallien S, Domon B.

Proteomics. 2016 Mar;16(5):715-28. doi: 10.1002/pmic.201500379. Review.

PMID:
26663565
16.

Proteomic analysis of phosphorylation, oxidation and nitrosylation in signal transduction.

Spickett CM, Pitt AR, Morrice N, Kolch W.

Biochim Biophys Acta. 2006 Dec;1764(12):1823-41. Review.

PMID:
17070740
17.

Post-translational modification of cardiac proteasomes: functional delineation enabled by proteomics.

Scruggs SB, Zong NC, Wang D, Stefani E, Ping P.

Am J Physiol Heart Circ Physiol. 2012 Jul;303(1):H9-18. doi: 10.1152/ajpheart.00189.2012. Review. Erratum in: Am J Physiol Heart Circ Physiol. 2012 Aug 15;303(4):H499.

18.

Proteomic analysis of post translational modifications in cyanobacteria.

Xiong Q, Chen Z, Ge F.

J Proteomics. 2016 Feb 16;134:57-64. doi: 10.1016/j.jprot.2015.07.037. Review.

PMID:
26254007
19.

A glimpse into the modulation of post-translational modifications of human-colonizing bacteria.

Bastos PA, da Costa JP, Vitorino R.

J Proteomics. 2017 Jan 30;152:254-275. doi: 10.1016/j.jprot.2016.11.005. Review.

PMID:
27888141
20.

Introduction to opportunities and pitfalls in functional mass spectrometry based proteomics.

Vaudel M, Sickmann A, Martens L.

Biochim Biophys Acta. 2014 Jan;1844(1 Pt A):12-20. doi: 10.1016/j.bbapap.2013.06.019. Review.

PMID:
23845992
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