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Bioinformatics. 2010 Aug 15;26(16):2062-3. doi: 10.1093/bioinformatics/btq334. Epub 2010 Jul 29.

ExpressionView--an interactive viewer for modules identified in gene expression data.

Author information

1
Swiss Institute of Bioinformatics, University of Lausanne, Lausanne, Switzerland.

Abstract

SUMMARY:

ExpressionView is an R package that provides an interactive graphical environment to explore transcription modules identified in gene expression data. A sophisticated ordering algorithm is used to present the modules with the expression in a visually appealing layout that provides an intuitive summary of the results. From this overview, the user can select individual modules and access biologically relevant metadata associated with them.

AVAILABILITY:

http://www.unil.ch/cbg/ExpressionView. Screenshots, tutorials and sample data sets can be found on the ExpressionView web site.

PMID:
20671149
DOI:
10.1093/bioinformatics/btq334
[Indexed for MEDLINE]
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