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Items: 5

1.

ChIPpeakAnno: a Bioconductor package to annotate ChIP-seq and ChIP-chip data.

Zhu LJ, Gazin C, Lawson ND, Pagès H, Lin SM, Lapointe DS, Green MR.

BMC Bioinformatics. 2010 May 11;11:237. doi: 10.1186/1471-2105-11-237.

2.

Role of ChIP-seq in the discovery of transcription factor binding sites, differential gene regulation mechanism, epigenetic marks and beyond.

Mundade R, Ozer HG, Wei H, Prabhu L, Lu T.

Cell Cycle. 2014;13(18):2847-52. doi: 10.4161/15384101.2014.949201. Review.

3.

Deciphering transcriptional control mechanisms in hematopoiesis:the impact of high-throughput sequencing technologies.

Wilson NK, Tijssen MR, Göttgens B.

Exp Hematol. 2011 Oct;39(10):961-8. doi: 10.1016/j.exphem.2011.07.005. Epub 2011 Jul 23. Review.

PMID:
21781948
4.

Biochemical Analysis of Genome Functions Using Locus-Specific Chromatin Immunoprecipitation Technologies.

Fujita T, Fujii H.

Gene Regul Syst Bio. 2016 Jan 18;10(Suppl 1):1-9. doi: 10.4137/GRSB.S32520. eCollection 2016. Review.

5.

Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses.

Usadel B, Nagel A, Thimm O, Redestig H, Blaesing OE, Palacios-Rojas N, Selbig J, Hannemann J, Piques MC, Steinhauser D, Scheible WR, Gibon Y, Morcuende R, Weicht D, Meyer S, Stitt M.

Plant Physiol. 2005 Jul;138(3):1195-204. Review.

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