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Items: 13

1.

Recombination rate and selection strength in HIV intra-patient evolution.

Neher RA, Leitner T.

PLoS Comput Biol. 2010 Jan 29;6(1):e1000660. doi: 10.1371/journal.pcbi.1000660.

2.

Evolutionary dynamics of HIV at multiple spatial and temporal scales.

Hill AL, Rosenbloom DI, Nowak MA.

J Mol Med (Berl). 2012 May;90(5):543-61. doi: 10.1007/s00109-012-0892-1. Epub 2012 May 3. Review.

PMID:
22552382
3.

HIV types, groups, subtypes and recombinant forms: errors in replication, selection pressure and quasispecies.

Eberle J, Gürtler L.

Intervirology. 2012;55(2):79-83. doi: 10.1159/000331993. Epub 2012 Jan 24. Review.

PMID:
22286874
4.

RNA structures, genomic organization and selection of recombinant HIV.

Simon-Loriere E, Rossolillo P, Negroni M.

RNA Biol. 2011 Mar-Apr;8(2):280-6. Epub 2011 Mar 1. Review.

PMID:
21422815
5.

HIV evolutionary dynamics within and among hosts.

Lemey P, Rambaut A, Pybus OG.

AIDS Rev. 2006 Jul-Sep;8(3):125-40. Review.

PMID:
17078483
6.

The remarkable frequency of human immunodeficiency virus type 1 genetic recombination.

Onafuwa-Nuga A, Telesnitsky A.

Microbiol Mol Biol Rev. 2009 Sep;73(3):451-80, Table of Contents. doi: 10.1128/MMBR.00012-09. Review.

7.

Contribution of recombination to the evolutionary history of HIV.

Vuilleumier S, Bonhoeffer S.

Curr Opin HIV AIDS. 2015 Mar;10(2):84-9. doi: 10.1097/COH.0000000000000137. Review.

PMID:
25565174
8.

The evolution of HIV: inferences using phylogenetics.

Castro-Nallar E, Pérez-Losada M, Burton GF, Crandall KA.

Mol Phylogenet Evol. 2012 Feb;62(2):777-92. doi: 10.1016/j.ympev.2011.11.019. Epub 2011 Nov 27. Review.

9.

Extensive purifying selection acting on synonymous sites in HIV-1 Group M sequences.

Ngandu NK, Scheffler K, Moore P, Woodman Z, Martin D, Seoighe C.

Virol J. 2008 Dec 23;5:160. doi: 10.1186/1743-422X-5-160. Review.

10.

Implications of HIV RNA structure for recombination, speciation, and the neutralism-selectionism controversy.

Forsdyke DR.

Microbes Infect. 2014 Feb;16(2):96-103. doi: 10.1016/j.micinf.2013.10.017. Epub 2013 Nov 7. Review.

PMID:
24211872
11.

Human population structure and the adaptive response to pathogen-induced selection pressures.

Novembre J, Han E.

Philos Trans R Soc Lond B Biol Sci. 2012 Mar 19;367(1590):878-86. doi: 10.1098/rstb.2011.0305. Review.

12.

The intra-host evolutionary and population dynamics of human immunodeficiency virus type 1: a phylogenetic perspective.

Salemi M.

Infect Dis Rep. 2013 Jun 6;5(Suppl 1):e3. doi: 10.4081/idr.2013.s1.e3. eCollection 2013 Jun 6. Review.

13.

Mechanisms and impact of genetic recombination in the evolution of Streptococcus pneumoniae.

Chaguza C, Cornick JE, Everett DB.

Comput Struct Biotechnol J. 2015 Apr 8;13:241-7. doi: 10.1016/j.csbj.2015.03.007. eCollection 2015. Review.

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