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Items: 12

1.

A System for Information Management in BioMedical Studies--SIMBioMS.

Krestyaninova M, Zarins A, Viksna J, Kurbatova N, Rucevskis P, Neogi SG, Gostev M, Perheentupa T, Knuuttila J, Barrett A, Lappalainen I, Rung J, Podnieks K, Sarkans U, McCarthy MI, Brazma A.

Bioinformatics. 2009 Oct 15;25(20):2768-9. doi: 10.1093/bioinformatics/btp420. Epub 2009 Jul 24.

2.

Extensible open source content management systems and frameworks: a solution for many needs of a bioinformatics group.

Mooney SD, Baenziger PH.

Brief Bioinform. 2008 Jan;9(1):69-74. Epub 2007 Dec 5. Review.

PMID:
18057072
3.

Automation of in-silico data analysis processes through workflow management systems.

Romano P.

Brief Bioinform. 2008 Jan;9(1):57-68. Epub 2007 Dec 2. Review.

PMID:
18056132
4.

Common file formats.

Leonard SA, Littlejohn TG, Baxevanis AD.

Curr Protoc Bioinformatics. 2007 Jan;Appendix 1:Appendix 1B. doi: 10.1002/0471250953.bia01bs16. Review.

PMID:
18428774
5.

Evolution of web services in bioinformatics.

Neerincx PB, Leunissen JA.

Brief Bioinform. 2005 Jun;6(2):178-88. Review.

PMID:
15975226
6.

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

BioMoby Consortium., Wilkinson MD, Senger M, Kawas E, Bruskiewich R, Gouzy J, Noirot C, Bardou P, Ng A, Haase D, Saiz Ede A, Wang D, Gibbons F, Gordon PM, Sensen CW, Carrasco JM, Fernández JM, Shen L, Links M, Ng M, Opushneva N, Neerincx PB, Leunissen JA, Ernst R, Twigger S, Usadel B, Good B, Wong Y, Stein L, Crosby W, Karlsson J, Royo R, Párraga I, Ramírez S, Gelpi JL, Trelles O, Pisano DG, Jimenez N, Kerhornou A, Rosset R, Zamacola L, Tarraga J, Huerta-Cepas J, Carazo JM, Dopazo J, Guigo R, Navarro A, Orozco M, Valencia A, Claros MG, Pérez AJ, Aldana J, Rojano M, Fernandez-Santa Cruz R, Navas I, Schiltz G, Farmer A, Gessler D, Schoof H, Groscurth A.

Brief Bioinform. 2008 May;9(3):220-31. doi: 10.1093/bib/bbn003. Epub 2008 Jan 31. Review.

PMID:
18238804
7.

Bioinformatics.

Moore JH.

J Cell Physiol. 2007 Nov;213(2):365-9. Review.

PMID:
17654500
8.

Data management in structural genomics: an overview.

Haquin S, Oeuillet E, Pajon A, Harris M, Jones AT, van Tilbeurgh H, Markley JL, Zolnai Z, Poupon A.

Methods Mol Biol. 2008;426:49-79. doi: 10.1007/978-1-60327-058-8_4. Review.

PMID:
18542857
9.

SPINE bioinformatics and data-management aspects of high-throughput structural biology.

Albeck S, Alzari P, Andreini C, Banci L, Berry IM, Bertini I, Cambillau C, Canard B, Carter L, Cohen SX, Diprose JM, Dym O, Esnouf RM, Felder C, Ferron F, Guillemot F, Hamer R, Ben Jelloul M, Laskowski RA, Laurent T, Longhi S, Lopez R, Luchinat C, Malet H, Mochel T, Morris RJ, Moulinier L, Oinn T, Pajon A, Peleg Y, Perrakis A, Poch O, Prilusky J, Rachedi A, Ripp R, Rosato A, Silman I, Stuart DI, Sussman JL, Thierry JC, Thompson JD, Thornton JM, Unger T, Vaughan B, Vranken W, Watson JD, Whamond G, Henrick K.

Acta Crystallogr D Biol Crystallogr. 2006 Oct;62(Pt 10):1184-95. Epub 2006 Sep 19. Review.

PMID:
17001095
10.

[Bioinformatics, systems biology and KEGG].

Honda W, Tanabe M, Yano A, Kanehisa M.

Seikagaku. 2008 Dec;80(12):1094-111. Review. Japanese. No abstract available.

PMID:
19172790
11.

ArrayTrack: a free FDA bioinformatics tool to support emerging biomedical research--an update.

Xu J, Kelly R, Fang H, Tong W.

Hum Genomics. 2010 Aug;4(6):428-34. Review.

12.

Enabling large-scale biomedical analysis in the cloud.

Lin YC, Yu CS, Lin YJ.

Biomed Res Int. 2013;2013:185679. doi: 10.1155/2013/185679. Epub 2013 Oct 31. Review.

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