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Items: 1 to 20 of 23

1.

Connecting extracellular metabolomic measurements to intracellular flux states in yeast.

Mo ML, Palsson BO, Herrgård MJ.

BMC Syst Biol. 2009 Mar 25;3:37. doi: 10.1186/1752-0509-3-37.

2.
3.

Dynamic flux balance analysis for synthetic microbial communities.

Henson MA, Hanly TJ.

IET Syst Biol. 2014 Oct;8(5):214-29. doi: 10.1049/iet-syb.2013.0021. Review.

PMID:
25257022
4.

Metabolic flux distributions: genetic information, computational predictions, and experimental validation.

Blank LM, Kuepfer L.

Appl Microbiol Biotechnol. 2010 May;86(5):1243-55. doi: 10.1007/s00253-010-2506-6. Epub 2010 Mar 16. Review.

PMID:
20232063
5.

Genome-scale metabolic networks.

Terzer M, Maynard ND, Covert MW, Stelling J.

Wiley Interdiscip Rev Syst Biol Med. 2009 Nov-Dec;1(3):285-97. doi: 10.1002/wsbm.37. Review.

PMID:
20835998
6.

Unveiling cellular biochemical reactions via metabolomics-driven approaches.

Saito N, Ohashi Y, Soga T, Tomita M.

Curr Opin Microbiol. 2010 Jun;13(3):358-62. doi: 10.1016/j.mib.2010.04.006. Epub 2010 Apr 27. Review.

PMID:
20430690
7.

Metabolome 2.0: quantitative genetics and network biology of metabolic phenotypes.

Dumas ME.

Mol Biosyst. 2012 Oct;8(10):2494-502. doi: 10.1039/c2mb25167a. Review.

PMID:
22868675
8.

Plasma amino acid analysis for diagnosis and amino acid-based metabolic networks.

Kimura T, Noguchi Y, Shikata N, Takahashi M.

Curr Opin Clin Nutr Metab Care. 2009 Jan;12(1):49-53. doi: 10.1097/MCO.0b013e3283169242. Review.

PMID:
19057187
9.

From genomes to systems: the path with yeast.

Oliver SG.

Philos Trans R Soc Lond B Biol Sci. 2006 Mar 29;361(1467):477-82. Review.

10.

Integration of metabolomics data into metabolic networks.

Töpfer N, Kleessen S, Nikoloski Z.

Front Plant Sci. 2015 Feb 17;6:49. doi: 10.3389/fpls.2015.00049. eCollection 2015. Review.

11.

Metabolic network modeling with model organisms.

Yilmaz LS, Walhout AJ.

Curr Opin Chem Biol. 2017 Feb;36:32-39. doi: 10.1016/j.cbpa.2016.12.025. Epub 2017 Jan 12. Review.

PMID:
28088694
12.

Metabolomics in systems microbiology.

Reaves ML, Rabinowitz JD.

Curr Opin Biotechnol. 2011 Feb;22(1):17-25. doi: 10.1016/j.copbio.2010.10.001. Epub 2010 Nov 1. Review.

13.

Metabolomics and systems pharmacology: why and how to model the human metabolic network for drug discovery.

Kell DB, Goodacre R.

Drug Discov Today. 2014 Feb;19(2):171-82. doi: 10.1016/j.drudis.2013.07.014. Epub 2013 Jul 26. Review. Erratum in: Drug Discov Today. 2014 Nov;19(11):1828.

14.

Systems biology from a yeast omics perspective.

Snyder M, Gallagher JE.

FEBS Lett. 2009 Dec 17;583(24):3895-9. doi: 10.1016/j.febslet.2009.11.011. Review.

15.

From single cells to our planet-recent advances in using mass spectrometry for spatially resolved metabolomics.

Petras D, Jarmusch AK, Dorrestein PC.

Curr Opin Chem Biol. 2017 Feb;36:24-31. doi: 10.1016/j.cbpa.2016.12.018. Epub 2017 Jan 10. Review.

PMID:
28086192
16.

The biomass objective function.

Feist AM, Palsson BO.

Curr Opin Microbiol. 2010 Jun;13(3):344-9. doi: 10.1016/j.mib.2010.03.003. Epub 2010 Apr 27. Review.

17.

Tracer-based metabolomics: concepts and practices.

Paul Lee WN, Wahjudi PN, Xu J, Go VL.

Clin Biochem. 2010 Nov;43(16-17):1269-77. doi: 10.1016/j.clinbiochem.2010.07.027. Epub 2010 Aug 14. Review.

18.

Systems biology, metabolic modelling and metabolomics in drug discovery and development.

Kell DB.

Drug Discov Today. 2006 Dec;11(23-24):1085-92. Epub 2006 Oct 19. Review.

PMID:
17129827
19.

Systematizing the generation of missing metabolic knowledge.

Orth JD, Palsson BØ.

Biotechnol Bioeng. 2010 Oct 15;107(3):403-12. doi: 10.1002/bit.22844. Review.

20.

Integrating metabolomics and phenomics with systems models of cardiac hypoxia.

Feala JD, Coquin L, Paternostro G, McCulloch AD.

Prog Biophys Mol Biol. 2008 Jan-Apr;96(1-3):209-25. Epub 2007 Aug 10. Review.

PMID:
17870149

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