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Items: 1 to 20 of 24

1.

Intrinsic disorder in protein interactions: insights from a comprehensive structural analysis.

Fong JH, Shoemaker BA, Garbuzynskiy SO, Lobanov MY, Galzitskaya OV, Panchenko AR.

PLoS Comput Biol. 2009 Mar;5(3):e1000316. doi: 10.1371/journal.pcbi.1000316. Epub 2009 Mar 13.

2.

Analyzing molecular interactions.

Petsko GA.

Curr Protoc Bioinformatics. 2003 May;Chapter 8:Unit8.1. doi: 10.1002/0471250953.bi0801s01. Review.

PMID:
18428708
3.

Interaction-site prediction for protein complexes: a critical assessment.

Zhou HX, Qin S.

Bioinformatics. 2007 Sep 1;23(17):2203-9. Epub 2007 Jun 22. Review.

PMID:
17586545
4.

Characterization and prediction of protein interfaces to infer protein-protein interaction networks.

Keskin O, Tuncbag N, Gursoy A.

Curr Pharm Biotechnol. 2008 Apr;9(2):67-76. Review.

PMID:
18393863
5.

Protein complexes: structure prediction challenges for the 21st century.

Aloy P, Pichaud M, Russell RB.

Curr Opin Struct Biol. 2005 Feb;15(1):15-22. Review.

PMID:
15718128
6.

Predicting 3D structures of protein-protein complexes.

Vakser IA, Kundrotas P.

Curr Pharm Biotechnol. 2008 Apr;9(2):57-66. Review.

PMID:
18393862
7.

Recognition-induced conformational changes in protein-protein docking.

Lensink MF, Méndez R.

Curr Pharm Biotechnol. 2008 Apr;9(2):77-86. Review.

PMID:
18393864
8.

Natively disordered proteins: functions and predictions.

Romero P, Obradovic Z, Dunker AK.

Appl Bioinformatics. 2004;3(2-3):105-13. Review.

PMID:
15693736
9.

In silico-in vitro screening of protein-protein interactions: towards the next generation of therapeutics.

Villoutreix BO, Bastard K, Sperandio O, Fahraeus R, Poyet JL, Calvo F, Déprez B, Miteva MA.

Curr Pharm Biotechnol. 2008 Apr;9(2):103-22. Review.

PMID:
18393867
10.

Natively unfolded proteins.

Fink AL.

Curr Opin Struct Biol. 2005 Feb;15(1):35-41. Review.

PMID:
15718131
11.

Molecular recognition and binding free energy calculations in drug development.

Dominy BN.

Curr Pharm Biotechnol. 2008 Apr;9(2):87-95. Review.

PMID:
18393865
12.

Calculating pH and salt dependence of protein-protein binding.

Jensen JH.

Curr Pharm Biotechnol. 2008 Apr;9(2):96-102. Review.

PMID:
18393866
13.

The multifaceted roles of intrinsic disorder in protein complexes.

Uversky VN.

FEBS Lett. 2015 Sep 14;589(19 Pt A):2498-506. doi: 10.1016/j.febslet.2015.06.004. Epub 2015 Jun 11. Review.

14.

Approaches and resources for prediction of the effects of non-synonymous single nucleotide polymorphism on protein function and interactions.

Teng S, Michonova-Alexova E, Alexov E.

Curr Pharm Biotechnol. 2008 Apr;9(2):123-33. Review.

PMID:
18393868
15.

Predicting protein function from sequence and structural data.

Watson JD, Laskowski RA, Thornton JM.

Curr Opin Struct Biol. 2005 Jun;15(3):275-84. Review.

PMID:
15963890
16.
17.

Inferring Pairwise Interactions from Biological Data Using Maximum-Entropy Probability Models.

Stein RR, Marks DS, Sander C.

PLoS Comput Biol. 2015 Jul 30;11(7):e1004182. doi: 10.1371/journal.pcbi.1004182. eCollection 2015 Jul. Review.

18.

Flexible nets. The roles of intrinsic disorder in protein interaction networks.

Dunker AK, Cortese MS, Romero P, Iakoucheva LM, Uversky VN.

FEBS J. 2005 Oct;272(20):5129-48. Review.

19.

Fuzzy complexes: a more stochastic view of protein function.

Fuxreiter M, Tompa P.

Adv Exp Med Biol. 2012;725:1-14. doi: 10.1007/978-1-4614-0659-4_1. Review.

PMID:
22399315
20.

Roles of intrinsic disorder in protein-nucleic acid interactions.

Dyson HJ.

Mol Biosyst. 2012 Jan;8(1):97-104. doi: 10.1039/c1mb05258f. Epub 2011 Aug 26. Review.

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