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Items: 1 to 20 of 22

1.

Repeatability of published microarray gene expression analyses.

Ioannidis JP, Allison DB, Ball CA, Coulibaly I, Cui X, Culhane AC, Falchi M, Furlanello C, Game L, Jurman G, Mangion J, Mehta T, Nitzberg M, Page GP, Petretto E, van Noort V.

Nat Genet. 2009 Feb;41(2):149-55. doi: 10.1038/ng.295. Epub 2008 Jan 28.

PMID:
19174838
2.

MGED standards: work in progress.

Ball CA, Brazma A.

OMICS. 2006 Summer;10(2):138-44. Review.

PMID:
16901218
3.

Microarray databases: standards and ontologies.

Stoeckert CJ Jr, Causton HC, Ball CA.

Nat Genet. 2002 Dec;32 Suppl:469-73. Review.

PMID:
12454640
4.

What statisticians should know about microarray gene expression technology.

Welle S.

Methods Mol Biol. 2013;972:1-13. doi: 10.1007/978-1-60327-337-4_1. Review.

PMID:
23385528
5.
6.

Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization.

Cahan P, Rovegno F, Mooney D, Newman JC, St Laurent G 3rd, McCaffrey TA.

Gene. 2007 Oct 15;401(1-2):12-8. Epub 2007 Jul 3. Review.

7.
8.

Computational strategies for analyzing data in gene expression microarray experiments.

Aittokallio T, Kurki M, Nevalainen O, Nikula T, West A, Lahesmaa R.

J Bioinform Comput Biol. 2003 Oct;1(3):541-86. Review.

PMID:
15290769
9.

Microarray analysis of gene expression: considerations in data mining and statistical treatment.

Verducci JS, Melfi VF, Lin S, Wang Z, Roy S, Sen CK.

Physiol Genomics. 2006 May 16;25(3):355-63. Epub 2006 Mar 22. Review.

PMID:
16554544
10.

Reproducible and reliable microarray results through quality control: good laboratory proficiency and appropriate data analysis practices are essential.

Shi L, Perkins RG, Fang H, Tong W.

Curr Opin Biotechnol. 2008 Feb;19(1):10-8. Epub 2007 Dec 26. Review.

PMID:
18155896
11.

Reliability and reproducibility issues in DNA microarray measurements.

Draghici S, Khatri P, Eklund AC, Szallasi Z.

Trends Genet. 2006 Feb;22(2):101-9. Epub 2005 Dec 27. Review.

12.

Post-analysis follow-up and validation of microarray experiments.

Chuaqui RF, Bonner RF, Best CJ, Gillespie JW, Flaig MJ, Hewitt SM, Phillips JL, Krizman DB, Tangrea MA, Ahram M, Linehan WM, Knezevic V, Emmert-Buck MR.

Nat Genet. 2002 Dec;32 Suppl:509-14. Review.

PMID:
12454646
13.

Normalization and quantification of differential expression in gene expression microarrays.

Steinhoff C, Vingron M.

Brief Bioinform. 2006 Jun;7(2):166-77. Epub 2006 Mar 7. Review.

PMID:
16772260
14.

Microarray analysis of ethanol-induced changes in gene expression.

Kerns RT, Miles MF.

Methods Mol Biol. 2008;447:395-410. doi: 10.1007/978-1-59745-242-7_26. Review.

PMID:
18369932
15.
16.

Comparison of conference abstracts and presentations with full-text articles in the health technology assessments of rapidly evolving technologies.

Dundar Y, Dodd S, Dickson R, Walley T, Haycox A, Williamson PR.

Health Technol Assess. 2006 Feb;10(5):iii-iv, ix-145. Review.

17.

Inferential literacy for experimental high-throughput biology.

Miron M, Nadon R.

Trends Genet. 2006 Feb;22(2):84-9. Epub 2005 Dec 27. Review.

PMID:
16377025
18.

Microarrays: lost in a storm of data?

Miles MF.

Nat Rev Neurosci. 2001 Jun;2(6):441-3. Review.

PMID:
11389479
19.

Standards in gene expression microarray experiments.

Salit M.

Methods Enzymol. 2006;411:63-78. Review.

PMID:
16939786
20.

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