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Items: 10

1.

Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains.

Nelson W, Luo M, Ma J, Estep M, Estill J, He R, Talag J, Sisneros N, Kudrna D, Kim H, Ammiraju JS, Collura K, Bharti AK, Messing J, Wing RA, SanMiguel P, Bennetzen JL, Soderlund C.

BMC Genomics. 2008 Dec 19;9:621. doi: 10.1186/1471-2164-9-621.

2.

Maize DNA-sequencing strategies and genome organization.

Okagaki RJ, Phillips RL.

Genome Biol. 2004;5(5):223. Epub 2004 Apr 16. Review.

3.

Sequencing the maize genome.

Martienssen RA, Rabinowicz PD, O'Shaughnessy A, McCombie WR.

Curr Opin Plant Biol. 2004 Apr;7(2):102-7. Review.

PMID:
15003207
4.

Organization and variability of the maize genome.

Messing J, Dooner HK.

Curr Opin Plant Biol. 2006 Apr;9(2):157-63. Epub 2006 Feb 3. Review.

PMID:
16459130
5.

The maize genome as a model for efficient sequence analysis of large plant genomes.

Rabinowicz PD, Bennetzen JL.

Curr Opin Plant Biol. 2006 Apr;9(2):149-56. Epub 2006 Feb 3. Review.

PMID:
16459129
6.

Optical mapping in plant comparative genomics.

Tang H, Lyons E, Town CD.

Gigascience. 2015 Feb 10;4:3. doi: 10.1186/s13742-015-0044-y. eCollection 2015. Review.

7.

Applications of alignment-free methods in epigenomics.

Pinello L, Lo Bosco G, Yuan GC.

Brief Bioinform. 2014 May;15(3):419-30. doi: 10.1093/bib/bbt078. Epub 2013 Nov 6. Review.

8.

Gene body DNA methylation in plants.

Bewick AJ, Schmitz RJ.

Curr Opin Plant Biol. 2017 Mar 1;36:103-110. doi: 10.1016/j.pbi.2016.12.007. [Epub ahead of print] Review.

PMID:
28258985
9.

Target-enrichment strategies for next-generation sequencing.

Mamanova L, Coffey AJ, Scott CE, Kozarewa I, Turner EH, Kumar A, Howard E, Shendure J, Turner DJ.

Nat Methods. 2010 Feb;7(2):111-8. doi: 10.1038/nmeth.1419. Review.

PMID:
20111037
10.

Snake Genome Sequencing: Results and Future Prospects.

Kerkkamp HM, Kini RM, Pospelov AS, Vonk FJ, Henkel CV, Richardson MK.

Toxins (Basel). 2016 Dec 1;8(12). pii: E360. Review.

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