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Items: 7

1.

Seeder: discriminative seeding DNA motif discovery.

Fauteux F, Blanchette M, Strömvik MV.

Bioinformatics. 2008 Oct 15;24(20):2303-7. doi: 10.1093/bioinformatics/btn444. Epub 2008 Aug 21.

2.

A survey of DNA motif finding algorithms.

Das MK, Dai HK.

BMC Bioinformatics. 2007 Nov 1;8 Suppl 7:S21. Review.

3.

Computational approaches to finding and analyzing cis-regulatory elements.

Brown CT.

Methods Cell Biol. 2008;87:337-65. doi: 10.1016/S0091-679X(08)00218-5. Review.

PMID:
18485306
4.

Eukaryotic transcription factor binding sites--modeling and integrative search methods.

Hannenhalli S.

Bioinformatics. 2008 Jun 1;24(11):1325-31. doi: 10.1093/bioinformatics/btn198. Epub 2008 Apr 21. Review.

PMID:
18426806
5.

Computational identification of transcriptional regulatory elements in DNA sequence.

GuhaThakurta D.

Nucleic Acids Res. 2006 Jul 19;34(12):3585-98. Print 2006. Review.

6.
7.

Computational prediction of transcription-factor binding site locations.

Bulyk ML.

Genome Biol. 2003;5(1):201. Epub 2003 Dec 23. Review.

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