Format
Sort by
Items per page

Send to

Choose Destination

Links from PubMed

Items: 15

1.

The Multiscale Systems Immunology project: software for cell-based immunological simulation.

Mitha F, Lucas TA, Feng F, Kepler TB, Chan C.

Source Code Biol Med. 2008 Apr 28;3:6. doi: 10.1186/1751-0473-3-6.

2.

Systems immunology: a survey of modeling formalisms, applications and simulation tools.

Narang V, Decraene J, Wong SY, Aiswarya BS, Wasem AR, Leong SR, Gouaillard A.

Immunol Res. 2012 Sep;53(1-3):251-65. doi: 10.1007/s12026-012-8305-7. Review.

PMID:
22528121
3.

Surgical model-view-controller simulation software framework for local and collaborative applications.

Maciel A, Sankaranarayanan G, Halic T, Arikatla VS, Lu Z, De S.

Int J Comput Assist Radiol Surg. 2011 Jul;6(4):457-71. doi: 10.1007/s11548-010-0527-3. Epub 2010 Aug 17. Review.

4.

Multi-class and multi-scale models of complex biological phenomena.

Yu JS, Bagheri N.

Curr Opin Biotechnol. 2016 Jun;39:167-73. doi: 10.1016/j.copbio.2016.04.002. Epub 2016 Apr 23. Review.

PMID:
27115496
5.

An analysis platform for multiscale hydrogeologic modeling with emphasis on hybrid multiscale methods.

Scheibe TD, Murphy EM, Chen X, Rice AK, Carroll KC, Palmer BJ, Tartakovsky AM, Battiato I, Wood BD.

Ground Water. 2015 Jan-Feb;53(1):38-56. doi: 10.1111/gwat.12179. Epub 2014 Mar 13. Review.

PMID:
24628122
6.

Multiscale modeling and mechanics of filamentous actin cytoskeleton.

Yamaoka H, Matsushita S, Shimada Y, Adachi T.

Biomech Model Mechanobiol. 2012 Mar;11(3-4):291-302. doi: 10.1007/s10237-011-0317-z. Epub 2011 May 26. Review.

PMID:
21614531
7.

Anatomy and Physiology of Multiscale Modeling and Simulation in Systems Medicine.

Mizeranschi A, Groen D, Borgdorff J, Hoekstra AG, Chopard B, Dubitzky W.

Methods Mol Biol. 2016;1386:375-404. doi: 10.1007/978-1-4939-3283-2_17. Review.

PMID:
26677192
8.

A global "imaging'' view on systems approaches in immunology.

Ludewig B, Stein JV, Sharpe J, Cervantes-Barragan L, Thiel V, Bocharov G.

Eur J Immunol. 2012 Dec;42(12):3116-25. doi: 10.1002/eji.201242508. Review.

9.

PUPIL: A Software Integration System for Multi-Scale QM/MM-MD Simulations and Its Application to Biomolecular Systems.

Torras J, Roberts BP, Seabra GM, Trickey SB.

Adv Protein Chem Struct Biol. 2015;100:1-31. doi: 10.1016/bs.apcsb.2015.06.002. Epub 2015 Jul 4. Review.

PMID:
26415839
10.

Relating biophysical properties across scales.

Flenner E, Marga F, Neagu A, Kosztin I, Forgacs G.

Curr Top Dev Biol. 2008;81:461-83. Review.

PMID:
18023738
11.

Integration from proteins to organs: the IUPS Physiome Project.

Hunter P, Smith N, Fernandez J, Tawhai M.

Mech Ageing Dev. 2005 Jan;126(1):187-92. Review.

PMID:
15610778
12.

Painful Multi-Symptom Disorders: A Systems Perspective.

Chapman CR.

In: Kruger L, Light AR, editors. Translational Pain Research: From Mouse to Man. Boca Raton, FL: CRC Press/Taylor & Francis; 2010. Chapter 1.

13.

Kinetic modeling of biological systems.

Resat H, Petzold L, Pettigrew MF.

Methods Mol Biol. 2009;541:311-35. doi: 10.1007/978-1-59745-243-4_14. Review.

14.

The GLEaMviz computational tool, a publicly available software to explore realistic epidemic spreading scenarios at the global scale.

Van den Broeck W, Gioannini C, Gonçalves B, Quaggiotto M, Colizza V, Vespignani A.

BMC Infect Dis. 2011 Feb 2;11:37. doi: 10.1186/1471-2334-11-37. Review.

15.

GPU computing for systems biology.

Dematté L, Prandi D.

Brief Bioinform. 2010 May;11(3):323-33. doi: 10.1093/bib/bbq006. Epub 2010 Mar 7. Review.

PMID:
20211843

Supplemental Content

Support Center