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Items: 17

1.

Shotgun bisulphite sequencing of the Arabidopsis genome reveals DNA methylation patterning.

Cokus SJ, Feng S, Zhang X, Chen Z, Merriman B, Haudenschild CD, Pradhan S, Nelson SF, Pellegrini M, Jacobsen SE.

Nature. 2008 Mar 13;452(7184):215-9. doi: 10.1038/nature06745.

2.

Finding the fifth base: genome-wide sequencing of cytosine methylation.

Lister R, Ecker JR.

Genome Res. 2009 Jun;19(6):959-66. doi: 10.1101/gr.083451.108. Review.

3.

DNA cytosine methylation in plant development.

Zhang M, Kimatu JN, Xu K, Liu B.

J Genet Genomics. 2010 Jan;37(1):1-12. doi: 10.1016/S1673-8527(09)60020-5. Review.

PMID:
20171573
4.

The first high-resolution DNA "methylome".

Schöb H, Grossniklaus U.

Cell. 2006 Sep 22;126(6):1025-8. Review.

5.

Studying the epigenome using next generation sequencing.

Ku CS, Naidoo N, Wu M, Soong R.

J Med Genet. 2011 Nov;48(11):721-30. doi: 10.1136/jmedgenet-2011-100242. Review.

PMID:
21825079
6.

Methylation and demethylation of the Arabidopsis genome.

Furner IJ, Matzke M.

Curr Opin Plant Biol. 2011 Apr;14(2):137-41. doi: 10.1016/j.pbi.2010.11.004. Review.

PMID:
21159546
7.

Genome-wide analysis of DNA methylation patterns.

Zilberman D, Henikoff S.

Development. 2007 Nov;134(22):3959-65. Review.

8.

Bisulfite methylation profiling of large genomes.

Reinders J, Paszkowski J.

Epigenomics. 2010 Apr;2(2):209-20. doi: 10.2217/epi.10.6. Review.

PMID:
22121871
9.

Sequencing 5-methylcytosine residues in genomic DNA.

Grigg G, Clark S.

Bioessays. 1994 Jun;16(6):431-6. Review.

PMID:
8080433
10.
11.

Principles and challenges of genomewide DNA methylation analysis.

Laird PW.

Nat Rev Genet. 2010 Mar;11(3):191-203. doi: 10.1038/nrg2732. Review.

PMID:
20125086
12.

Mapping the genome landscape using tiling array technology.

Yazaki J, Gregory BD, Ecker JR.

Curr Opin Plant Biol. 2007 Oct;10(5):534-42. Review.

13.

High-throughput approaches for plant epigenomic studies.

Schmitz RJ, Zhang X.

Curr Opin Plant Biol. 2011 Apr;14(2):130-6. doi: 10.1016/j.pbi.2011.03.010. Review.

14.

Next is now: new technologies for sequencing of genomes, transcriptomes, and beyond.

Lister R, Gregory BD, Ecker JR.

Curr Opin Plant Biol. 2009 Apr;12(2):107-18. doi: 10.1016/j.pbi.2008.11.004. Review.

15.

Altered DNA methylation and genome instability: a new pathway to cancer?

Jones PA, Gonzalgo ML.

Proc Natl Acad Sci U S A. 1997 Mar 18;94(6):2103-5. Review. No abstract available.

16.

Genome-wide assays that identify and quantify modified cytosines in human disease studies.

Ulahannan N, Greally JM.

Epigenetics Chromatin. 2015 Jan 22;8:5. doi: 10.1186/1756-8935-8-5. Review.

17.

Putting DNA methylation in context: from genomes to gene expression in plants.

Niederhuth CE, Schmitz RJ.

Biochim Biophys Acta. 2017 Jan;1860(1):149-156. doi: 10.1016/j.bbagrm.2016.08.009. Review.

PMID:
27590871

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