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Items: 1 to 20 of 47

1.

MetaBasis: a web-based database containing metadata on software tools and databases in the field of bioinformatics.

Atlamazoglou V, Thireou T, Hamodrakas Y, Spyrou G.

Appl Bioinformatics. 2006;5(3):187-92.

PMID:
16922600
2.

Evolution of web services in bioinformatics.

Neerincx PB, Leunissen JA.

Brief Bioinform. 2005 Jun;6(2):178-88. Review.

PMID:
15975226
3.

Web tools for predictive toxicology model building.

Jeliazkova N.

Expert Opin Drug Metab Toxicol. 2012 Jul;8(7):791-801. doi: 10.1517/17425255.2012.685158. Epub 2012 May 12. Review.

PMID:
22577953
4.

Bioinformatics.

Moore JH.

J Cell Physiol. 2007 Nov;213(2):365-9. Review.

PMID:
17654500
5.

Extensible open source content management systems and frameworks: a solution for many needs of a bioinformatics group.

Mooney SD, Baenziger PH.

Brief Bioinform. 2008 Jan;9(1):69-74. Epub 2007 Dec 5. Review.

PMID:
18057072
6.

Seeing data: new methods for understanding information.

Kroeker KL.

IEEE Comput Graph Appl. 2004 May-Jun;24(3):6-12. Review. No abstract available.

PMID:
15628066
7.

Bioinformatics software resources.

Gilbert D.

Brief Bioinform. 2004 Sep;5(3):300-4. Review.

PMID:
15383216
8.

Interoperability with Moby 1.0--it's better than sharing your toothbrush!

BioMoby Consortium, Wilkinson MD, Senger M, Kawas E, Bruskiewich R, Gouzy J, Noirot C, Bardou P, Ng A, Haase D, Saiz Ede A, Wang D, Gibbons F, Gordon PM, Sensen CW, Carrasco JM, Fernández JM, Shen L, Links M, Ng M, Opushneva N, Neerincx PB, Leunissen JA, Ernst R, Twigger S, Usadel B, Good B, Wong Y, Stein L, Crosby W, Karlsson J, Royo R, Párraga I, Ramírez S, Gelpi JL, Trelles O, Pisano DG, Jimenez N, Kerhornou A, Rosset R, Zamacola L, Tarraga J, Huerta-Cepas J, Carazo JM, Dopazo J, Guigo R, Navarro A, Orozco M, Valencia A, Claros MG, Pérez AJ, Aldana J, Rojano M, Fernandez-Santa Cruz R, Navas I, Schiltz G, Farmer A, Gessler D, Schoof H, Groscurth A.

Brief Bioinform. 2008 May;9(3):220-31. doi: 10.1093/bib/bbn003. Epub 2008 Jan 31. Review.

PMID:
18238804
9.

Bioimage informatics for experimental biology.

Swedlow JR, Goldberg IG, Eliceiri KW; OME Consortium.

Annu Rev Biophys. 2009;38:327-46. doi: 10.1146/annurev.biophys.050708.133641. Review.

10.

Cross-organism analysis using InterMine.

Lyne R, Sullivan J, Butano D, Contrino S, Heimbach J, Hu F, Kalderimis A, Lyne M, Smith RN, Štěpán R, Balakrishnan R, Binkley G, Harris T, Karra K, Moxon SA, Motenko H, Neuhauser S, Ruzicka L, Cherry M, Richardson J, Stein L, Westerfield M, Worthey E, Micklem G.

Genesis. 2015 Aug;53(8):547-60. doi: 10.1002/dvg.22869. Epub 2015 Jul 8. Review.

11.

A survey of metabolic databases emphasizing the MetaCyc family.

Karp PD, Caspi R.

Arch Toxicol. 2011 Sep;85(9):1015-33. doi: 10.1007/s00204-011-0705-2. Epub 2011 Apr 27. Review.

12.

Web resources for microbial data.

Sun Q, Liu L, Wu L, Li W, Liu Q, Zhang J, Liu D, Ma J.

Genomics Proteomics Bioinformatics. 2015 Feb;13(1):69-72. doi: 10.1016/j.gpb.2015.01.008. Epub 2015 Feb 23. Review.

13.

Web resources for model organism studies.

Tang B, Wang Y, Zhu J, Zhao W.

Genomics Proteomics Bioinformatics. 2015 Feb;13(1):64-8. doi: 10.1016/j.gpb.2015.01.003. Epub 2015 Feb 20. Review.

14.

The Australian EEG database.

Hunter M, Smith RL, Hyslop W, Rosso OA, Gerlach R, Rostas JA, Williams DB, Henskens F.

Clin EEG Neurosci. 2005 Apr;36(2):76-81. Review.

PMID:
15999902
15.

SPEM: a parser for EMBL style flat file database entries.

Pocock MR, Hubbard T, Birney E.

Bioinformatics. 1998;14(9):823-4. Review.

PMID:
9918956
16.

Facilitating the use of large-scale biological data and tools in the era of translational bioinformatics.

Kouskoumvekaki I, Shublaq N, Brunak S.

Brief Bioinform. 2014 Nov;15(6):942-52. doi: 10.1093/bib/bbt055. Epub 2013 Aug 1. Review.

PMID:
23908249
17.

Sharing best practice: developing a Web-based database.

Gerrish K, Entwistle B, Parmakis G, Morgan L, Taylor C, Debbage S, Warnock C, Gerrish P, Szasz S.

Br J Nurs. 2004 Jan 8-21;13(1):44-8. Review.

PMID:
14966452
18.

Bioinformatics tools and database resources for systems genetics analysis in mice--a short review and an evaluation of future needs.

Durrant C, Swertz MA, Alberts R, Arends D, Möller S, Mott R, Prins P, van der Velde KJ, Jansen RC, Schughart K.

Brief Bioinform. 2012 Mar;13(2):135-42. doi: 10.1093/bib/bbr026. Epub 2011 Jul 8. Review.

19.

Bioinformatics and its applications in plant biology.

Rhee SY, Dickerson J, Xu D.

Annu Rev Plant Biol. 2006;57:335-60. Review.

PMID:
16669765
20.

Creating databases for biological information: an introduction.

Stein L.

Curr Protoc Bioinformatics. 2013 Jun;Chapter 9:Unit9.1. doi: 10.1002/0471250953.bi0901s42. Review.

PMID:
23749755

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