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Items: 1 to 20 of 52

1.

Systems analyses characterize integrated functions of biochemical networks.

Gianchandani EP, Brautigan DL, Papin JA.

Trends Biochem Sci. 2006 May;31(5):284-91. Review.

PMID:
16616498
2.

Bioinformatics and cellular signaling.

Papin J, Subramaniam S.

Curr Opin Biotechnol. 2004 Feb;15(1):78-81. Review.

PMID:
15102471
3.

Reconstruction of cellular signalling networks and analysis of their properties.

Papin JA, Hunter T, Palsson BO, Subramaniam S.

Nat Rev Mol Cell Biol. 2005 Feb;6(2):99-111. Review.

PMID:
15654321
4.

Current trends in the bioinformatic sequence analysis of metabolic pathways in prokaryotes.

Brilli M, Fani R, Liò P.

Brief Bioinform. 2008 Jan;9(1):34-45. Review.

5.
6.

Modeling of signaling networks.

Neves SR, Iyengar R.

Bioessays. 2002 Dec;24(12):1110-7. Review.

PMID:
12447976
7.

Scale-free networks in cell biology.

Albert R.

J Cell Sci. 2005 Nov 1;118(Pt 21):4947-57. Review.

8.

A structured approach for the engineering of biochemical network models, illustrated for signalling pathways.

Breitling R, Gilbert D, Heiner M, Orton R.

Brief Bioinform. 2008 Sep;9(5):404-21. doi: 10.1093/bib/bbn026. Review.

9.

Proteomic and computational methods in systems modeling of cellular signaling.

Kleppe R, Kjarland E, Selheim F.

Curr Pharm Biotechnol. 2006 Jun;7(3):135-45. Review.

PMID:
16789899
10.

Understanding complex signaling networks through models and metaphors.

Bhalla US.

Prog Biophys Mol Biol. 2003 Jan;81(1):45-65. Review.

PMID:
12475569
11.

Charting protein complexes, signaling pathways, and networks in the immune system.

Bauch A, Superti-Furga G.

Immunol Rev. 2006 Apr;210:187-207. Review.

PMID:
16623772
12.

Systems-level insights into cellular regulation: inferring, analysing, and modelling intracellular networks.

Christensen C, Thakar J, Albert R.

IET Syst Biol. 2007 Mar;1(2):61-77. Review.

PMID:
17441550
13.

Representing, storing and accessing molecular interaction data: a review of models and tools.

Strömbäck L, Jakoniene V, Tan H, Lambrix P.

Brief Bioinform. 2006 Dec;7(4):331-8. Review.

14.

Network analysis approach for biology.

Kwoh CK, Ng PY.

Cell Mol Life Sci. 2007 Jul;64(14):1739-51. Review.

PMID:
17415520
15.

Gene regulatory network inference: data integration in dynamic models-a review.

Hecker M, Lambeck S, Toepfer S, van Someren E, Guthke R.

Biosystems. 2009 Apr;96(1):86-103. doi: 10.1016/j.biosystems.2008.12.004. Review.

PMID:
19150482
16.

Biological networks and analysis of experimental data in drug discovery.

Nikolsky Y, Nikolskaya T, Bugrim A.

Drug Discov Today. 2005 May 1;10(9):653-62. Review.

PMID:
15894230
17.

Predictive non-linear modeling of complex data by artificial neural networks.

Almeida JS.

Curr Opin Biotechnol. 2002 Feb;13(1):72-6. Review.

PMID:
11849962
18.

Structure-based systems biology: a zoom lens for the cell.

Aloy P, Russell RB.

FEBS Lett. 2005 Mar 21;579(8):1854-8. Review.

19.

The executable pathway to biological networks.

Fisher J, Piterman N.

Brief Funct Genomics. 2010 Jan;9(1):79-92. doi: 10.1093/bfgp/elp054. Review.

20.

Synthetic modular systems--reverse engineering of signal transduction.

Pawson T, Linding R.

FEBS Lett. 2005 Mar 21;579(8):1808-14. Review.

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