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Items: 1 to 20 of 25

1.

Folding and binding cascades: dynamic landscapes and population shifts.

Kumar S, Ma B, Tsai CJ, Sinha N, Nussinov R.

Protein Sci. 2000 Jan;9(1):10-9. Review.

2.

Folding funnels and conformational transitions via hinge-bending motions.

Kumar S, Ma B, Tsai CJ, Wolfson H, Nussinov R.

Cell Biochem Biophys. 1999;31(2):141-64. Review.

PMID:
10593256
3.

Folding funnels, binding funnels, and protein function.

Tsai CJ, Kumar S, Ma B, Nussinov R.

Protein Sci. 1999 Jun;8(6):1181-90. Review.

4.

Allostery and population shift in drug discovery.

Kar G, Keskin O, Gursoy A, Nussinov R.

Curr Opin Pharmacol. 2010 Dec;10(6):715-22. doi: 10.1016/j.coph.2010.09.002. Epub 2010 Sep 29. Review.

PMID:
20884293
5.

Folding funnels and binding mechanisms.

Ma B, Kumar S, Tsai CJ, Nussinov R.

Protein Eng. 1999 Sep;12(9):713-20. Review.

PMID:
10506280
6.

Mathematics of protein pathological misfolding.

Armah EO.

Math Biosci. 2007 Jul;208(1):1-25. Epub 2006 Sep 8. Review.

PMID:
17157330
7.

Folding and binding cascades: shifts in energy landscapes.

Tsai CJ, Ma B, Nussinov R.

Proc Natl Acad Sci U S A. 1999 Aug 31;96(18):9970-2. Review. No abstract available.

8.

The role of dynamics in allosteric regulation.

Kern D, Zuiderweg ER.

Curr Opin Struct Biol. 2003 Dec;13(6):748-57. Review.

PMID:
14675554
9.

Functional versus folding landscapes: the same yet different.

Zhuravlev PI, Papoian GA.

Curr Opin Struct Biol. 2010 Feb;20(1):16-22. doi: 10.1016/j.sbi.2009.12.010. Epub 2010 Jan 25. Review.

PMID:
20102791
10.

Multiple diverse ligands binding at a single protein site: a matter of pre-existing populations.

Ma B, Shatsky M, Wolfson HJ, Nussinov R.

Protein Sci. 2002 Feb;11(2):184-97. Review.

11.

Protein folding: binding of conformationally fluctuating building blocks via population selection.

Tsai CD, Ma B, Kumar S, Wolfson H, Nussinov R.

Crit Rev Biochem Mol Biol. 2001;36(5):399-433. Review.

PMID:
11724155
12.

Protein binding versus protein folding: the role of hydrophilic bridges in protein associations.

Xu D, Lin SL, Nussinov R.

J Mol Biol. 1997 Jan 10;265(1):68-84. Review.

PMID:
8995525
13.

Energy landscapes and solved protein-folding problems.

Wolynes PG.

Philos Trans A Math Phys Eng Sci. 2005 Feb 15;363(1827):453-64; discussion 464-7. Review.

14.

Theory of protein folding.

Onuchic JN, Wolynes PG.

Curr Opin Struct Biol. 2004 Feb;14(1):70-5. Review.

PMID:
15102452
15.

From protein folding to protein function and biomolecular binding by energy landscape theory.

Schug A, Onuchic JN.

Curr Opin Pharmacol. 2010 Dec;10(6):709-14. doi: 10.1016/j.coph.2010.09.012. Epub 2010 Oct 14. Review.

PMID:
20951644
16.

Side-chain conformational entropy in protein folding.

Doig AJ, Sternberg MJ.

Protein Sci. 1995 Nov;4(11):2247-51. Review.

17.

Water mediation in protein folding and molecular recognition.

Levy Y, Onuchic JN.

Annu Rev Biophys Biomol Struct. 2006;35:389-415. Review.

PMID:
16689642
18.

From valleys to ridges: exploring the dynamic energy landscape of single membrane proteins.

Janovjak H, Sapra KT, Kedrov A, Müller DJ.

Chemphyschem. 2008 May 16;9(7):954-66. doi: 10.1002/cphc.200700662. Review.

PMID:
18348129
19.

Protein conformational populations and functionally relevant substates.

Ramanathan A, Savol A, Burger V, Chennubhotla CS, Agarwal PK.

Acc Chem Res. 2014 Jan 21;47(1):149-56. doi: 10.1021/ar400084s. Epub 2013 Aug 29. Review.

PMID:
23988159
20.

Toward a better understanding of protein folding pathways.

Creighton TE.

Proc Natl Acad Sci U S A. 1988 Jul;85(14):5082-6. Review.

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