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The complete genome sequence of Cronobacter sakazakii ATCC 29544T, a food-borne pathogen, isolated from a child's throat.

Kim S, Kim YT, Yoon H, Lee JH, Ryu S.

Gut Pathog. 2017 Jan 4;9:2. doi: 10.1186/s13099-016-0150-0.


Combined Whole-Cell High-Throughput Functional Screening for Identification of New Nicotinamidases/Pyrazinamidases in Metagenomic/Polygenomic Libraries.

Zapata-Pérez R, García-Saura AG, Jebbar M, Golyshin PN, Sánchez-Ferrer Á.

Front Microbiol. 2016 Nov 29;7:1915. doi: 10.3389/fmicb.2016.01915.


Lotus Base: An integrated information portal for the model legume Lotus japonicus.

Mun T, Bachmann A, Gupta V, Stougaard J, Andersen SU.

Sci Rep. 2016 Dec 23;6:39447. doi: 10.1038/srep39447.


Pseudogenes and Their Genome-Wide Prediction in Plants.

Xiao J, Sekhwal MK, Li P, Ragupathy R, Cloutier S, Wang X, You FM.

Int J Mol Sci. 2016 Nov 28;17(12). pii: E1991. Review.


The genome of the crustacean Parhyale hawaiensis, a model for animal development, regeneration, immunity and lignocellulose digestion.

Kao D, Lai AG, Stamataki E, Rosic S, Konstantinides N, Jarvis E, Di Donfrancesco A, Pouchkina-Stancheva N, Semon M, Grillo M, Bruce H, Kumar S, Siwanowicz I, Le A, Lemire A, Eisen MB, Extavour C, Browne WE, Wolff C, Averof M, Patel NH, Sarkies P, Pavlopoulos A, Aboobaker A.

Elife. 2016 Nov 16;5. pii: e20062. doi: 10.7554/eLife.20062.


Genomic Evolution of Two Acinetobacter baumannii Clinical Strains from ST-2 Clones Isolated in 2000 and 2010 (ST-2_clon_2000 and ST-2_clon_2010).

López M, Rueda A, Florido JP, Blasco L, Gato E, Fernández-García L, Martínez-Martínez L, Fernández-Cuenca F, Pachón J, Cisneros JM, Garnacho-Montero J, Vila J, Rodríguez-Baño J, Pascual A, Bou G, Tomás M.

Genome Announc. 2016 Oct 20;4(5). pii: e01182-16. doi: 10.1128/genomeA.01182-16.


Comparative genomics of 9 novel Paenibacillus larvae bacteriophages.

Stamereilers C, LeBlanc L, Yost D, Amy PS, Tsourkas PK.

Bacteriophage. 2016 Aug 5;6(3):e1220349.


Geographic Impact on Genomic Divergence as Revealed by Comparison of Nine Citromicrobial Genomes.

Zheng Q, Liu Y, Jeanthon C, Zhang R, Lin W, Yao J, Jiao N.

Appl Environ Microbiol. 2016 Nov 21;82(24):7205-7216.


Assembling the Setaria italica L. Beauv. genome into nine chromosomes and insights into regions affecting growth and drought tolerance.

Tsai KJ, Lu MJ, Yang KJ, Li M, Teng Y, Chen S, Ku MS, Li WH.

Sci Rep. 2016 Oct 13;6:35076. doi: 10.1038/srep35076.


Short Exon Detection via Wavelet Transform Modulus Maxima.

Zhang X, Shen Z, Zhang G, Shen Y, Chen M, Zhao J, Wu R.

PLoS One. 2016 Sep 16;11(9):e0163088. doi: 10.1371/journal.pone.0163088.


First Draft Genome Sequence of a UK Strain (UK99) of Fusarium culmorum.

Urban M, King R, Andongabo A, Maheswari U, Pedro H, Kersey P, Hammond-Kosack K.

Genome Announc. 2016 Sep 15;4(5). pii: e00771-16. doi: 10.1128/genomeA.00771-16.


High quality draft genome sequence of the type strain of Pseudomonas lutea OK2(T), a phosphate-solubilizing rhizospheric bacterium.

Kwak Y, Park GS, Shin JH.

Stand Genomic Sci. 2016 Aug 23;11(1):51. doi: 10.1186/s40793-016-0173-7.


Strains of the Propionibacterium acnes type III lineage are associated with the skin condition progressive macular hypomelanosis.

Barnard E, Liu J, Yankova E, Cavalcanti SM, Magalhães M, Li H, Patrick S, McDowell A.

Sci Rep. 2016 Aug 24;6:31968. doi: 10.1038/srep31968.


Living apart together: crosstalk between the core and supernumerary genomes in a fungal plant pathogen.

Vanheule A, Audenaert K, Warris S, van de Geest H, Schijlen E, Höfte M, De Saeger S, Haesaert G, Waalwijk C, van der Lee T.

BMC Genomics. 2016 Aug 23;17:670. doi: 10.1186/s12864-016-2941-6.


Characterization of Five Podoviridae Phages Infecting Citrobacter freundii.

Hamdi S, Rousseau GM, Labrie SJ, Kourda RS, Tremblay DM, Moineau S, Slama KB.

Front Microbiol. 2016 Jun 29;7:1023. doi: 10.3389/fmicb.2016.01023.


A New Catabolic Plasmid in Xanthobacter and Starkeya spp. from a 1,2-Dichloroethane-Contaminated Site.

Munro JE, Liew EF, Ly MA, Coleman NV.

Appl Environ Microbiol. 2016 Aug 15;82(17):5298-308. doi: 10.1128/AEM.01373-16.


NCBI prokaryotic genome annotation pipeline.

Tatusova T, DiCuccio M, Badretdin A, Chetvernin V, Nawrocki EP, Zaslavsky L, Lomsadze A, Pruitt KD, Borodovsky M, Ostell J.

Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569.


A proposed integrated approach for the preclinical evaluation of phage therapy in Pseudomonas infections.

Danis-Wlodarczyk K, Vandenheuvel D, Jang HB, Briers Y, Olszak T, Arabski M, Wasik S, Drabik M, Higgins G, Tyrrell J, Harvey BJ, Noben JP, Lavigne R, Drulis-Kawa Z.

Sci Rep. 2016 Jun 15;6:28115. doi: 10.1038/srep28115.

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