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Items: 1 to 20 of 141


Kinetics and Thermodynamics of DNA Processing by Wild Type DNA-Glycosylase Endo III and Its Catalytically Inactive Mutant Forms.

Kladova OA, Krasnoperov LN, Kuznetsov NA, Fedorova OS.

Genes (Basel). 2018 Mar 30;9(4). pii: E190. doi: 10.3390/genes9040190.


The Oxidation State of [4Fe4S] Clusters Modulates the DNA-Binding Affinity of DNA Repair Proteins.

Tse ECM, Zwang TJ, Barton JK.

J Am Chem Soc. 2017 Sep 13;139(36):12784-12792. doi: 10.1021/jacs.7b07230. Epub 2017 Aug 29.


Probing the activity of NTHL1 orthologs by targeting conserved amino acid residues.

Robey-Bond SM, Benson MA, Barrantes-Reynolds R, Bond JP, Wallace SS.

DNA Repair (Amst). 2017 May;53:43-51. doi: 10.1016/j.dnarep.2017.02.014. Epub 2017 Mar 6.


Electrochemistry of the [4Fe4S] Cluster in Base Excision Repair Proteins: Tuning the Redox Potential with DNA.

Bartels PL, Zhou A, Arnold AR, Nuñez NN, Crespilho FN, David SS, Barton JK.

Langmuir. 2017 Mar 14;33(10):2523-2530. doi: 10.1021/acs.langmuir.6b04581. Epub 2017 Mar 2.


Structural Basis for the Lesion-scanning Mechanism of the MutY DNA Glycosylase.

Wang L, Chakravarthy S, Verdine GL.

J Biol Chem. 2017 Mar 24;292(12):5007-5017. doi: 10.1074/jbc.M116.757039. Epub 2017 Jan 27.


Sulfolobus acidocaldarius UDG Can Remove dU from the RNA Backbone: Insight into the Specific Recognition of Uracil Linked with Deoxyribose.

Yi GS, Wang WW, Cao WG, Wang FP, Liu XP.

Genes (Basel). 2017 Jan 18;8(1). pii: E38. doi: 10.3390/genes8010038.


Redox Signaling through DNA.

O'Brien E, Silva RM, Barton JK.

Isr J Chem. 2016 Oct;56(9-10):705-723. doi: 10.1002/ijch.201600022. Epub 2016 Jul 29.


Identification of SUMO modification sites in the base excision repair protein, Ntg1.

Swartzlander DB, McPherson AJ, Powers HR, Limpose KL, Kuiper EG, Degtyareva NP, Corbett AH, Doetsch PW.

DNA Repair (Amst). 2016 Dec;48:51-62. doi: 10.1016/j.dnarep.2016.10.011. Epub 2016 Oct 31.


Stability of an amphipathic helix-hairpin surfactant peptide in liposomes.

Waring AJ, Gupta M, Gordon LM, Fujii G, Walther FJ.

Biochim Biophys Acta. 2016 Dec;1858(12):3113-3119. doi: 10.1016/j.bbamem.2016.09.014. Epub 2016 Sep 21.


Functional complementation of Leishmania (Leishmania) amazonensis AP endonuclease gene (lamap) in Escherichia coli mutant strains challenged with DNA damage agents.

Verissimo-Villela E, Kitahara-Oliveira MY, Reis AB, Albano RM, Da-Cruz AM, Bello AR.

Mem Inst Oswaldo Cruz. 2016 May;111(5):349-54. doi: 10.1590/0074-02760150412.


Methanopyrus kandleri topoisomerase V contains three distinct AP lyase active sites in addition to the topoisomerase active site.

Rajan R, Osterman A, Mondragón A.

Nucleic Acids Res. 2016 Apr 20;44(7):3464-74. doi: 10.1093/nar/gkw122. Epub 2016 Feb 22.


An Oomycete CRN Effector Reprograms Expression of Plant HSP Genes by Targeting their Promoters.

Song T, Ma Z, Shen D, Li Q, Li W, Su L, Ye T, Zhang M, Wang Y, Dou D.

PLoS Pathog. 2015 Dec 29;11(12):e1005348. doi: 10.1371/journal.ppat.1005348. eCollection 2015 Dec.


Structure and stereochemistry of the base excision repair glycosylase MutY reveal a mechanism similar to retaining glycosidases.

Woods RD, O'Shea VL, Chu A, Cao S, Richards JL, Horvath MP, David SS.

Nucleic Acids Res. 2016 Jan 29;44(2):801-10. doi: 10.1093/nar/gkv1469. Epub 2015 Dec 15.


DNA Processing Proteins Involved in the UV-Induced Stress Response of Sulfolobales.

van Wolferen M, Ma X, Albers SV.

J Bacteriol. 2015 Sep;197(18):2941-51. doi: 10.1128/JB.00344-15. Epub 2015 Jul 6.


Structural Basis for Avoidance of Promutagenic DNA Repair by MutY Adenine DNA Glycosylase.

Wang L, Lee SJ, Verdine GL.

J Biol Chem. 2015 Jul 10;290(28):17096-105. doi: 10.1074/jbc.M115.657866. Epub 2015 May 20.


Conformational Dynamics of DNA Repair by Escherichia coli Endonuclease III.

Kuznetsov NA, Kladova OA, Kuznetsova AA, Ishchenko AA, Saparbaev MK, Zharkov DO, Fedorova OS.

J Biol Chem. 2015 Jun 5;290(23):14338-49. doi: 10.1074/jbc.M114.621128. Epub 2015 Apr 13.


Electrochemistry of nonconjugated proteins and glycoproteins. Toward sensors for biomedicine and glycomics.

Paleček E, Tkáč J, Bartošík M, Bertók T, Ostatná V, Paleček J.

Chem Rev. 2015 Mar 11;115(5):2045-108. doi: 10.1021/cr500279h. Epub 2015 Feb 9. Review. No abstract available.


Emerging critical roles of Fe-S clusters in DNA replication and repair.

Fuss JO, Tsai CL, Ishida JP, Tainer JA.

Biochim Biophys Acta. 2015 Jun;1853(6):1253-71. doi: 10.1016/j.bbamcr.2015.01.018. Epub 2015 Feb 2. Review.

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