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Items: 20

1.

DWNN-RLS: regularized least squares method for predicting circRNA-disease associations.

Yan C, Wang J, Wu FX.

BMC Bioinformatics. 2018 Dec 31;19(Suppl 19):520. doi: 10.1186/s12859-018-2522-6.

2.

Systematics for types and effects of DNA variations.

Vihinen M.

BMC Genomics. 2018 Dec 28;19(1):974. doi: 10.1186/s12864-018-5262-0. Review.

3.

miRNA Mediated Noise Making of 3'UTR Mutations in Cancer.

Wu W, Wu L, Zhu M, Wang Z, Wu M, Li P, Nie Y, Lin X, Hu J, Eskilsson E, Wang Q, Shao J, Lyu S.

Genes (Basel). 2018 Nov 12;9(11). pii: E545. doi: 10.3390/genes9110545.

4.

Circular RNAs: Methodological challenges and perspectives in cardiovascular diseases.

Carrara M, Fuschi P, Ivan C, Martelli F.

J Cell Mol Med. 2018 Nov;22(11):5176-5187. doi: 10.1111/jcmm.13789. Epub 2018 Sep 11. Review.

5.

Functional role of circular RNAs in cancer development and progression.

Ng WL, Mohd Mohidin TB, Shukla K.

RNA Biol. 2018;15(8):995-1005. doi: 10.1080/15476286.2018.1486659. Epub 2018 Aug 4. Review.

PMID:
29954251
6.

CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases.

Fan C, Lei X, Fang Z, Jiang Q, Wu FX.

Database (Oxford). 2018 Jan 1;2018. doi: 10.1093/database/bay044.

7.

Pathway perturbations in signaling networks: Linking genotype to phenotype.

Li Y, McGrail DJ, Latysheva N, Yi S, Babu MM, Sahni N.

Semin Cell Dev Biol. 2018 May 10. pii: S1084-9521(17)30528-1. doi: 10.1016/j.semcdb.2018.05.001. [Epub ahead of print] Review.

PMID:
29738884
8.

MIR142 Loss-of-Function Mutations Derepress ASH1L to Increase HOXA Gene Expression and Promote Leukemogenesis.

Trissal MC, Wong TN, Yao JC, Ramaswamy R, Kuo I, Baty J, Sun Y, Jih G, Parikh N, Berrien-Elliott MM, Fehniger TA, Ley TJ, Maillard I, Reddy PR, Link DC.

Cancer Res. 2018 Jul 1;78(13):3510-3521. doi: 10.1158/0008-5472.CAN-17-3592. Epub 2018 May 3.

PMID:
29724719
9.

Clustering Pattern and Functional Effect of SNPs in Human miRNA Seed Regions.

He S, Ou H, Zhao C, Zhang J.

Int J Genomics. 2018 Mar 6;2018:2456076. doi: 10.1155/2018/2456076. eCollection 2018.

10.

Long non-coding RNA HOTTIP promotes BCL-2 expression and induces chemoresistance in small cell lung cancer by sponging miR-216a.

Sun Y, Hu B, Wang Q, Ye M, Qiu Q, Zhou Y, Zeng F, Zhang X, Guo Y, Guo L.

Cell Death Dis. 2018 Jan 24;9(2):85. doi: 10.1038/s41419-017-0113-5.

11.

Non-coding RNA networks in cancer.

Anastasiadou E, Jacob LS, Slack FJ.

Nat Rev Cancer. 2018 Jan;18(1):5-18. doi: 10.1038/nrc.2017.99. Epub 2017 Nov 24. Review.

12.

Interaction and cross-talk between non-coding RNAs.

Yamamura S, Imai-Sumida M, Tanaka Y, Dahiya R.

Cell Mol Life Sci. 2018 Feb;75(3):467-484. doi: 10.1007/s00018-017-2626-6. Epub 2017 Aug 24. Review.

13.

Systematic Prediction of the Impacts of Mutations in MicroRNA Seed Sequences.

Bhattacharya A, Cui Y.

J Integr Bioinform. 2017 May 18;14(1). pii: /j/jib.2017.14.issue-1/jib-2017-0001/jib-2017-0001.xml. doi: 10.1515/jib-2017-0001.

14.

Genome-wide profiling of Sus scrofa circular RNAs across nine organs and three developmental stages.

Liang G, Yang Y, Niu G, Tang Z, Li K.

DNA Res. 2017 Oct 1;24(5):523-535. doi: 10.1093/dnares/dsx022.

15.

High-throughput validation of ceRNA regulatory networks.

Chiu HS, Martínez MR, Bansal M, Subramanian A, Golub TR, Yang X, Sumazin P, Califano A.

BMC Genomics. 2017 May 30;18(1):418. doi: 10.1186/s12864-017-3790-7.

16.

Long non-coding RNAs act as regulators of cell autophagy in diseases (Review).

Xu Z, Yan Y, Qian L, Gong Z.

Oncol Rep. 2017 Mar;37(3):1359-1366. doi: 10.3892/or.2017.5416. Epub 2017 Feb 1. Review.

17.

LNCediting: a database for functional effects of RNA editing in lncRNAs.

Gong J, Liu C, Liu W, Xiang Y, Diao L, Guo AY, Han L.

Nucleic Acids Res. 2017 Jan 4;45(D1):D79-D84. doi: 10.1093/nar/gkw835. Epub 2016 Sep 19.

18.

Targeted Cancer Therapy: Vital Oncogenes and a New Molecular Genetic Paradigm for Cancer Initiation Progression and Treatment.

Willis RE.

Int J Mol Sci. 2016 Sep 14;17(9). pii: E1552. doi: 10.3390/ijms17091552. Review.

19.

Web-based tools for microRNAs involved in human cancer.

Mar-Aguilar F, Rodríguez-Padilla C, Reséndez-Pérez D.

Oncol Lett. 2016 Jun;11(6):3563-3570. Epub 2016 Apr 18.

20.

ImiRP: a computational approach to microRNA target site mutation.

Ryan BC, Werner TS, Howard PL, Chow RL.

BMC Bioinformatics. 2016 Apr 27;17:190. doi: 10.1186/s12859-016-1057-y.

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