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Items: 6

1.

Bioinformatics Resource Manager: a systems biology web tool for microRNA and omics data integration.

Brown J, Phillips AR, Lewis DA, Mans MA, Chang Y, Tanguay RL, Peterson ES, Waters KM, Tilton SC.

BMC Bioinformatics. 2019 May 17;20(1):255. doi: 10.1186/s12859-019-2805-6.

2.

miRBaseConverter: an R/Bioconductor package for converting and retrieving miRNA name, accession, sequence and family information in different versions of miRBase.

Xu T, Su N, Liu L, Zhang J, Wang H, Zhang W, Gui J, Yu K, Li J, Le TD.

BMC Bioinformatics. 2018 Dec 31;19(Suppl 19):514. doi: 10.1186/s12859-018-2531-5.

3.

Selection and Application of Tissue microRNAs for Nonendoscopic Diagnosis of Barrett's Esophagus.

Li X, Kleeman S, Coburn SB, Fumagalli C, Perner J, Jammula S, Pfeiffer RM, Orzolek L, Hao H, Taylor PR, Miremadi A, Galeano-Dalmau N, Lao-Sirieix P, Tennyson M, MacRae S, Cook MB, Fitzgerald RC.

Gastroenterology. 2018 Sep;155(3):771-783.e3. doi: 10.1053/j.gastro.2018.05.050. Epub 2018 Jun 12.

4.

microRNA profiles in urine by next-generation sequencing can stratify bladder cancer subtypes.

Pardini B, Cordero F, Naccarati A, Viberti C, Birolo G, Oderda M, Di Gaetano C, Arigoni M, Martina F, Calogero RA, Sacerdote C, Gontero P, Vineis P, Matullo G.

Oncotarget. 2018 Apr 17;9(29):20658-20669. doi: 10.18632/oncotarget.25057. eCollection 2018 Apr 17.

5.

miRNAtools: Advanced Training Using the miRNA Web of Knowledge.

Stępień EŁ, Costa MC, Enguita FJ.

Noncoding RNA. 2018 Feb 16;4(1). pii: E5. doi: 10.3390/ncrna4010005.

6.

A benchmark for microRNA quantification algorithms using the OpenArray platform.

McCall MN, Baras AS, Crits-Christoph A, Ingersoll R, McAlexander MA, Witwer KW, Halushka MK.

BMC Bioinformatics. 2016 Mar 22;17:138. doi: 10.1186/s12859-016-0987-8.

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