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Items: 1 to 20 of 44


The protein regulator ArgR and the sRNA derived from the 3'-UTR region of its gene, ArgX, both regulate the arginine deiminase pathway in Lactococcus lactis.

van der Meulen SB, Hesseling-Meinders A, de Jong A, Kok J.

PLoS One. 2019 Jun 20;14(6):e0218508. doi: 10.1371/journal.pone.0218508. eCollection 2019.


Refining the Pneumococcal Competence Regulon by RNA Sequencing.

Slager J, Aprianto R, Veening JW.

J Bacteriol. 2019 Jun 10;201(13). pii: e00780-18. doi: 10.1128/JB.00780-18. Print 2019 Jul 1.


Putative small RNAs controlling detoxification of industrial cyanide-containing wastewaters by Pseudomonas pseudoalcaligenes CECT5344.

Olaya-Abril A, Luque-Almagro VM, Pérez MD, López CM, Amil F, Cabello P, Sáez LP, Moreno-Vivián C, Roldán MD.

PLoS One. 2019 Feb 8;14(2):e0212032. doi: 10.1371/journal.pone.0212032. eCollection 2019.


Bacterial Small RNAs in the Genus Herbaspirillum spp.

Carvalho Garcia A, Dos Santos VLP, Santos Cavalcanti TC, Collaço LM, Graf H.

Int J Mol Sci. 2018 Dec 22;20(1). pii: E46. doi: 10.3390/ijms20010046.


Functional expansion of a TCA cycle operon mRNA by a 3' end-derived small RNA.

Miyakoshi M, Matera G, Maki K, Sone Y, Vogel J.

Nucleic Acids Res. 2019 Feb 28;47(4):2075-2088. doi: 10.1093/nar/gky1243.


Deletion of a conserved transcript PG_RS02100 expressed during logarithmic growth in Porphyromonas gingivalis results in hyperpigmentation and increased tolerance to oxidative stress.

Phillips PL, Reyes L, Sampson EM, Murrell EA, Whitlock JA, Progulske-Fox A.

PLoS One. 2018 Nov 12;13(11):e0207295. doi: 10.1371/journal.pone.0207295. eCollection 2018.


Identification of a Novel Small RNA srvg23535 in Vibrio alginolyticus ZJ-T and Its Characterization With Phenotype MicroArray Technology.

Deng Y, Su Y, Liu S, Guo Z, Cheng C, Ma H, Wu J, Feng J, Chen C.

Front Microbiol. 2018 Oct 5;9:2394. doi: 10.3389/fmicb.2018.02394. eCollection 2018. Erratum in: Front Microbiol. 2019 Jan 31;10:21.


Interactive implementations of thermodynamics-based RNA structure and RNA-RNA interaction prediction approaches for example-driven teaching.

Raden M, Mohamed MM, Ali SM, Backofen R.

PLoS Comput Biol. 2018 Aug 30;14(8):e1006341. doi: 10.1371/journal.pcbi.1006341. eCollection 2018 Aug.


Non-coding RNAs Potentially Controlling Cell Cycle in the Model Caulobacter crescentus: A Bioinformatic Approach.

Beroual W, Brilli M, Biondi EG.

Front Genet. 2018 May 30;9:164. doi: 10.3389/fgene.2018.00164. eCollection 2018.


Small RNA profiling in Mycobacterium tuberculosis identifies MrsI as necessary for an anticipatory iron sparing response.

Gerrick ER, Barbier T, Chase MR, Xu R, François J, Lin VH, Szucs MJ, Rock JM, Ahmad R, Tjaden B, Livny J, Fortune SM.

Proc Natl Acad Sci U S A. 2018 Jun 19;115(25):6464-6469. doi: 10.1073/pnas.1718003115. Epub 2018 Jun 5.


Small and Low but Potent: the Complex Regulatory Role of the Small RNA SolB in Solventogenesis in Clostridium acetobutylicum.

Jones AJ, Fast AG, Clupper M, Papoutsakis ET.

Appl Environ Microbiol. 2018 Jul 2;84(14). pii: e00597-18. doi: 10.1128/AEM.00597-18. Print 2018 Jul 15.


Small RNAs of Haloferax mediterranei: Identification and Potential Involvement in Nitrogen Metabolism.

Payá G, Bautista V, Camacho M, Castejón-Fernández N, Alcaraz LA, Bonete MJ, Esclapez J.

Genes (Basel). 2018 Feb 10;9(2). pii: E83. doi: 10.3390/genes9020083.


Streptococcus sanguinis Noncoding cia-Dependent Small RNAs Negatively Regulate Expression of Type IV Pilus Retraction ATPase PilT and Biofilm Formation.

Ota C, Morisaki H, Nakata M, Arimoto T, Fukamachi H, Kataoka H, Masuda Y, Suzuki N, Miyazaki T, Okahashi N, Kuwata H.

Infect Immun. 2018 Feb 20;86(3). pii: e00894-17. doi: 10.1128/IAI.00894-17. Print 2018 Mar.


Regulation of Neisseria meningitidis cytochrome bc1 components by NrrF, a Fur-controlled small noncoding RNA.

Pannekoek Y, Huis In 't Veld R, Schipper K, Bovenkerk S, Kramer G, Speijer D, van der Ende A.

FEBS Open Bio. 2017 Aug 5;7(9):1302-1315. doi: 10.1002/2211-5463.12266. eCollection 2017 Sep.


EsrE-A yigP Locus-Encoded Transcript-Is a 3' UTR sRNA Involved in the Respiratory Chain of E. coli.

Xia H, Yang X, Tang Q, Ye J, Wu H, Zhang H.

Front Microbiol. 2017 Aug 29;8:1658. doi: 10.3389/fmicb.2017.01658. eCollection 2017.


Hfq links translation repression to stress-induced mutagenesis in E. coli.

Chen J, Gottesman S.

Genes Dev. 2017 Jul 1;31(13):1382-1395. doi: 10.1101/gad.302547.117. Epub 2017 Aug 9.


A novel small RNA is important for biofilm formation and pathogenicity in Pseudomonas aeruginosa.

Taylor PK, Van Kessel ATM, Colavita A, Hancock REW, Mah TF.

PLoS One. 2017 Aug 3;12(8):e0182582. doi: 10.1371/journal.pone.0182582. eCollection 2017.


Construction of a fur null mutant and RNA-sequencing provide deeper global understanding of the Aliivibrio salmonicida Fur regulon.

Thode SK, Bækkedal C, Söderberg JJ, Hjerde E, Hansen H, Haugen P.

PeerJ. 2017 Jul 13;5:e3461. doi: 10.7717/peerj.3461. eCollection 2017.


Detecting RNA-RNA interactions in E. coli using a modified CLASH method.

Liu T, Zhang K, Xu S, Wang Z, Fu H, Tian B, Zheng X, Li W.

BMC Genomics. 2017 May 3;18(1):343. doi: 10.1186/s12864-017-3725-3.

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