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Items: 1 to 20 of 21

1.

Computational Methods for the Pharmacogenetic Interpretation of Next Generation Sequencing Data.

Zhou Y, Fujikura K, Mkrtchian S, Lauschke VM.

Front Pharmacol. 2018 Dec 4;9:1437. doi: 10.3389/fphar.2018.01437. eCollection 2018. Review.

2.

regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors.

Wilk G, Braun R.

PLoS Genet. 2018 Dec 17;14(12):e1007837. doi: 10.1371/journal.pgen.1007837. eCollection 2018 Dec.

3.

Exploring the Impact of Single-Nucleotide Polymorphisms on Translation.

Robert F, Pelletier J.

Front Genet. 2018 Oct 30;9:507. doi: 10.3389/fgene.2018.00507. eCollection 2018. Review.

4.

Uncovering association networks through an eQTL analysis involving human miRNAs and lincRNAs.

Branco PR, de Araújo GS, Barrera J, Suarez-Kurtz G, de Souza SJ.

Sci Rep. 2018 Oct 9;8(1):15050. doi: 10.1038/s41598-018-33420-z.

5.

Single Nucleotide Polymorphism Facilitated Down-Regulation of the Cohesin Stromal Antigen-1: Implications for Colorectal Cancer Racial Disparities.

Datta S, Sherva RM, De La Cruz M, Long MT, Roy P, Backman V, Chowdhury S, Roy HK.

Neoplasia. 2018 Mar;20(3):289-294. doi: 10.1016/j.neo.2018.01.003. Epub 2018 Feb 19.

6.

A novel LPL intronic variant: g.18704C>A identified by re-sequencing Kuwaiti Arab samples is associated with high-density lipoprotein, very low-density lipoprotein and triglyceride lipid levels.

Al-Bustan SA, Al-Serri A, Annice BG, Alnaqeeb MA, Al-Kandari WY, Dashti M.

PLoS One. 2018 Feb 13;13(2):e0192617. doi: 10.1371/journal.pone.0192617. eCollection 2018.

7.

Association of a 3' untranslated region polymorphism in proprotein convertase subtilisin/kexin type 9 with HIV viral load and CD4+ levels in HIV/hepatitis C virus coinfected women.

Kuniholm MH, Liang H, Anastos K, Gustafson D, Kassaye S, Nowicki M, Sha BE, Pawlowski EJ, Gange SJ, Aouizerat BE, Pushkarsky T, Bukrinsky MI, Prasad VR.

AIDS. 2017 Nov 28;31(18):2483-2492. doi: 10.1097/QAD.0000000000001648.

8.

MSDD: a manually curated database of experimentally supported associations among miRNAs, SNPs and human diseases.

Yue M, Zhou D, Zhi H, Wang P, Zhang Y, Gao Y, Guo M, Li X, Wang Y, Zhang Y, Ning S, Li X.

Nucleic Acids Res. 2018 Jan 4;46(D1):D181-D185. doi: 10.1093/nar/gkx1035.

9.

Cis-acting single nucleotide polymorphisms alter MicroRNA-mediated regulation of human brain-expressed transcripts.

Ramachandran S, Coffin SL, Tang TY, Jobaliya CD, Spengler RM, Davidson BL.

Hum Mol Genet. 2016 Nov 15;25(22):4939-4950. doi: 10.1093/hmg/ddw317.

10.

ImiRP: a computational approach to microRNA target site mutation.

Ryan BC, Werner TS, Howard PL, Chow RL.

BMC Bioinformatics. 2016 Apr 27;17:190. doi: 10.1186/s12859-016-1057-y.

11.

A unified analytic framework for prioritization of non-coding variants of uncertain significance in heritable breast and ovarian cancer.

Mucaki EJ, Caminsky NG, Perri AM, Lu R, Laederach A, Halvorsen M, Knoll JH, Rogan PK.

BMC Med Genomics. 2016 Apr 11;9:19. doi: 10.1186/s12920-016-0178-5.

12.

Variations in ORAI1 Gene Associated with Kawasaki Disease.

Onouchi Y, Fukazawa R, Yamamura K, Suzuki H, Kakimoto N, Suenaga T, Takeuchi T, Hamada H, Honda T, Yasukawa K, Terai M, Ebata R, Higashi K, Saji T, Kemmotsu Y, Takatsuki S, Ouchi K, Kishi F, Yoshikawa T, Nagai T, Hamamoto K, Sato Y, Honda A, Kobayashi H, Sato J, Shibuta S, Miyawaki M, Oishi K, Yamaga H, Aoyagi N, Yoshiyama M, Miyashita R, Murata Y, Fujino A, Ozaki K, Kawasaki T, Abe J, Seki M, Kobayashi T, Arakawa H, Ogawa S, Hara T, Hata A, Tanaka T.

PLoS One. 2016 Jan 20;11(1):e0145486. doi: 10.1371/journal.pone.0145486. eCollection 2016.

13.

A variant at a potentially functional microRNA-binding site in BRIP1 was associated with risk of squamous cell carcinoma of the head and neck.

Liu H, Gao F, Dahlstrom KR, Li G, Sturgis EM, Zevallos JP, Wei Q, Liu Z.

Tumour Biol. 2016 Jun;37(6):8057-66. doi: 10.1007/s13277-015-4682-6. Epub 2015 Dec 28.

14.

Altered Gene Expression Associated with microRNA Binding Site Polymorphisms.

Võsa U, Esko T, Kasela S, Annilo T.

PLoS One. 2015 Oct 23;10(10):e0141351. doi: 10.1371/journal.pone.0141351. eCollection 2015.

15.

miRVaS: a tool to predict the impact of genetic variants on miRNAs.

Cammaerts S, Strazisar M, Dierckx J, Del Favero J, De Rijk P.

Nucleic Acids Res. 2016 Feb 18;44(3):e23. doi: 10.1093/nar/gkv921. Epub 2015 Sep 17.

16.

An update of miRNASNP database for better SNP selection by GWAS data, miRNA expression and online tools.

Gong J, Liu C, Liu W, Wu Y, Ma Z, Chen H, Guo AY.

Database (Oxford). 2015 Apr 15;2015:bav029. doi: 10.1093/database/bav029. Print 2015.

17.

SubmiRine: assessing variants in microRNA targets using clinical genomic data sets.

Maxwell EK, Campbell JD, Spira A, Baxevanis AD.

Nucleic Acids Res. 2015 Apr 30;43(8):3886-98. doi: 10.1093/nar/gkv256. Epub 2015 Mar 26.

18.

Genetic variability of microRNA regulome in human.

Obsteter J, Dovc P, Kunej T.

Mol Genet Genomic Med. 2015 Jan;3(1):30-9. doi: 10.1002/mgg3.110. Epub 2014 Sep 15.

19.

Single nucleotide variations: biological impact and theoretical interpretation.

Katsonis P, Koire A, Wilson SJ, Hsu TK, Lua RC, Wilkins AD, Lichtarge O.

Protein Sci. 2014 Dec;23(12):1650-66. doi: 10.1002/pro.2552. Epub 2014 Oct 20. Review.

20.

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