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Items: 1 to 20 of 29

1.

Automated analysis of small RNA datasets with RAPID.

Karunanithi S, Simon M, Schulz MH.

PeerJ. 2019 Apr 10;7:e6710. doi: 10.7717/peerj.6710. eCollection 2019.

2.

Tumor stem-like cell-derived exosomal RNAs prime neutrophils for facilitating tumorigenesis of colon cancer.

Hwang WL, Lan HY, Cheng WC, Huang SC, Yang MH.

J Hematol Oncol. 2019 Jan 25;12(1):10. doi: 10.1186/s13045-019-0699-4.

3.

Pain-Associated Transcriptome Changes in Synovium of Knee Osteoarthritis Patients.

Bratus-Neuenschwander A, Castro-Giner F, Frank-Bertoncelj M, Aluri S, Fucentese SF, Schlapbach R, Sprott H.

Genes (Basel). 2018 Jul 4;9(7). pii: E338. doi: 10.3390/genes9070338.

4.

A Suppressor Screen for AGO1 Degradation by the Viral F-Box P0 Protein Uncovers a Role for AGO DUF1785 in sRNA Duplex Unwinding.

Derrien B, Clavel M, Baumberger N, Iki T, Sarazin A, Hacquard T, Ponce MR, Ziegler-Graff V, Vaucheret H, Micol JL, Voinnet O, Genschik P.

Plant Cell. 2018 Jun;30(6):1353-1374. doi: 10.1105/tpc.18.00111. Epub 2018 May 30.

5.

SPAR: small RNA-seq portal for analysis of sequencing experiments.

Kuksa PP, Amlie-Wolf A, Katanic Ž, Valladares O, Wang LS, Leung YY.

Nucleic Acids Res. 2018 Jul 2;46(W1):W36-W42. doi: 10.1093/nar/gky330.

6.

Quiescence unveils a novel mutational force in fission yeast.

Gangloff S, Achaz G, Francesconi S, Villain A, Miled S, Denis C, Arcangioli B.

Elife. 2017 Dec 18;6. pii: e27469. doi: 10.7554/eLife.27469.

7.

Dual effects of constitutively active androgen receptor and full-length androgen receptor for N-cadherin regulation in prostate cancer.

Cottard F, Madi-Berthélémy PO, Erdmann E, Schaff-Wendling F, Keime C, Ye T, Kurtz JE, Céraline J.

Oncotarget. 2017 May 29;8(42):72008-72020. doi: 10.18632/oncotarget.18270. eCollection 2017 Sep 22.

8.

lncRNA MIR100HG-derived miR-100 and miR-125b mediate cetuximab resistance via Wnt/β-catenin signaling.

Lu Y, Zhao X, Liu Q, Li C, Graves-Deal R, Cao Z, Singh B, Franklin JL, Wang J, Hu H, Wei T, Yang M, Yeatman TJ, Lee E, Saito-Diaz K, Hinger S, Patton JG, Chung CH, Emmrich S, Klusmann JH, Fan D, Coffey RJ.

Nat Med. 2017 Nov;23(11):1331-1341. doi: 10.1038/nm.4424. Epub 2017 Oct 16.

9.

MicroRNAs 146a/b-5 and 425-3p and 24-3p are markers of antidepressant response and regulate MAPK/Wnt-system genes.

Lopez JP, Fiori LM, Cruceanu C, Lin R, Labonte B, Cates HM, Heller EA, Vialou V, Ku SM, Gerald C, Han MH, Foster J, Frey BN, Soares CN, Müller DJ, Farzan F, Leri F, MacQueen GM, Feilotter H, Tyryshkin K, Evans KR, Giacobbe P, Blier P, Lam RW, Milev R, Parikh SV, Rotzinger S, Strother SC, Lewis CM, Aitchison KJ, Wittenberg GM, Mechawar N, Nestler EJ, Uher R, Kennedy SH, Turecki G.

Nat Commun. 2017 May 22;8:15497. doi: 10.1038/ncomms15497.

10.

A single miR390 targeting event is sufficient for triggering TAS3-tasiRNA biogenesis in Arabidopsis.

de Felippes FF, Marchais A, Sarazin A, Oberlin S, Voinnet O.

Nucleic Acids Res. 2017 May 19;45(9):5539-5554. doi: 10.1093/nar/gkx119.

11.

Epigenetically-driven anatomical diversity of synovial fibroblasts guides joint-specific fibroblast functions.

Frank-Bertoncelj M, Trenkmann M, Klein K, Karouzakis E, Rehrauer H, Bratus A, Kolling C, Armaka M, Filer A, Michel BA, Gay RE, Buckley CD, Kollias G, Gay S, Ospelt C.

Nat Commun. 2017 Mar 23;8:14852. doi: 10.1038/ncomms14852.

12.

Persistence of Coxsackievirus B4 in pancreatic ductal-like cells results in cellular and viral changes.

Alidjinou EK, Engelmann I, Bossu J, Villenet C, Figeac M, Romond MB, Sané F, Hober D.

Virulence. 2017 Oct 3;8(7):1229-1244. doi: 10.1080/21505594.2017.1284735. Epub 2017 Jan 23.

13.

Integrating Epigenomics into the Understanding of Biomedical Insight.

Han Y, He X.

Bioinform Biol Insights. 2016 Dec 4;10:267-289. eCollection 2016. Review.

14.

Doxycycline, metronidazole and isotretinoin: Do they modify microRNA/mRNA expression profiles and function in murine T-cells?

Becker E, Bengs S, Aluri S, Opitz L, Atrott K, Stanzel C, Castro PAR, Rogler G, Frey-Wagner I.

Sci Rep. 2016 Nov 17;6:37082. doi: 10.1038/srep37082.

15.

The microRNA cluster miR-183/96/182 contributes to long-term memory in a protein phosphatase 1-dependent manner.

Woldemichael BT, Jawaid A, Kremer EA, Gaur N, Krol J, Marchais A, Mansuy IM.

Nat Commun. 2016 Aug 25;7:12594. doi: 10.1038/ncomms12594.

16.

The Slicer Activity of ARGONAUTE1 Is Required Specifically for the Phasing, Not Production, of Trans-Acting Short Interfering RNAs in Arabidopsis.

Arribas-Hernández L, Marchais A, Poulsen C, Haase B, Hauptmann J, Benes V, Meister G, Brodersen P.

Plant Cell. 2016 Jul;28(7):1563-80. doi: 10.1105/tpc.16.00121. Epub 2016 Jun 27.

17.

DDX3 Represses Stemness by Epigenetically Modulating Tumor-suppressive miRNAs in Hepatocellular Carcinoma.

Li HK, Mai RT, Huang HD, Chou CH, Chang YA, Chang YW, You LR, Chen CM, Lee YH.

Sci Rep. 2016 Jun 27;6:28637. doi: 10.1038/srep28637.

18.

Hepatitis C Virus-Induced Upregulation of MicroRNA miR-146a-5p in Hepatocytes Promotes Viral Infection and Deregulates Metabolic Pathways Associated with Liver Disease Pathogenesis.

Bandiera S, Pernot S, El Saghire H, Durand SC, Thumann C, Crouchet E, Ye T, Fofana I, Oudot MA, Barths J, Schuster C, Pessaux P, Heim MH, Baumert TF, Zeisel MB.

J Virol. 2016 Jun 24;90(14):6387-6400. doi: 10.1128/JVI.00619-16. Print 2016 Jul 15.

19.

The Lin28/let-7 axis is critical for myelination in the peripheral nervous system.

Gökbuget D, Pereira JA, Bachofner S, Marchais A, Ciaudo C, Stoffel M, Schulte JH, Suter U.

Nat Commun. 2015 Oct 14;6:8584. doi: 10.1038/ncomms9584.

20.

SKI2 mediates degradation of RISC 5'-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis.

Branscheid A, Marchais A, Schott G, Lange H, Gagliardi D, Andersen SU, Voinnet O, Brodersen P.

Nucleic Acids Res. 2015 Dec 15;43(22):10975-88. doi: 10.1093/nar/gkv1014. Epub 2015 Oct 12.

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