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Items: 1 to 20 of 98


Complete Genome Sequence of the Freshwater Bacterium Beggiatoa leptomitoformis Strain D-401.

Fomenkov A, Sun Z, Vincze T, Dubinina G, Orlova M, Tarlachkov SV, Anton BP, Grabovich MY, Roberts RJ.

Genome Announc. 2018 Apr 26;6(17). pii: e00311-18. doi: 10.1128/genomeA.00311-18.


Influence of Electron-Holes on DNA Sequence-Specific Mutation Rates.

Suárez-Villagrán MY, Azevedo RBR, Miller JH Jr.

Genome Biol Evol. 2018 Apr 1;10(4):1039-1047. doi: 10.1093/gbe/evy060.


A survey of Type III restriction-modification systems reveals numerous, novel epigenetic regulators controlling phase-variable regulons; phasevarions.

Atack JM, Yang Y, Seib KL, Zhou Y, Jennings MP.

Nucleic Acids Res. 2018 Mar 15. doi: 10.1093/nar/gky192. [Epub ahead of print]


Resolving the complete genome of Kuenenia stuttgartiensis from a membrane bioreactor enrichment using Single-Molecule Real-Time sequencing.

Frank J, Lücker S, Vossen RHAM, Jetten MSM, Hall RJ, Op den Camp HJM, Anvar SY.

Sci Rep. 2018 Mar 15;8(1):4580. doi: 10.1038/s41598-018-23053-7.


Characterizing the DNA Methyltransferases of Haloferax volcanii via Bioinformatics, Gene Deletion, and SMRT Sequencing.

Ouellette M, Gogarten JP, Lajoie J, Makkay AM, Papke RT.

Genes (Basel). 2018 Feb 27;9(3). pii: E129. doi: 10.3390/genes9030129.


N4-cytosine DNA methylation regulates transcription and pathogenesis in Helicobacter pylori.

Kumar S, Karmakar BC, Nagarajan D, Mukhopadhyay AK, Morgan RD, Rao DN.

Nucleic Acids Res. 2018 Feb 22. doi: 10.1093/nar/gky126. [Epub ahead of print]


The DNA Methylome of the Hyperthermoacidophilic Crenarchaeon Sulfolobus acidocaldarius.

Couturier M, Lindås AC.

Front Microbiol. 2018 Feb 8;9:137. doi: 10.3389/fmicb.2018.00137. eCollection 2018.


Complete Genome Sequence and Methylome Analysis of Bacillus caldolyticus NEB414.

Fomenkov A, Vincze T, Mersha F, Roberts RJ.

Genome Announc. 2018 Feb 8;6(6). pii: e01605-17. doi: 10.1128/genomeA.01605-17.


The non-specific adenine DNA methyltransferase M.EcoGII.

Murray IA, Morgan RD, Luyten Y, Fomenkov A, Corrêa IR Jr, Dai N, Allaw MB, Zhang X, Cheng X, Roberts RJ.

Nucleic Acids Res. 2018 Jan 25;46(2):840-848. doi: 10.1093/nar/gkx1191.


Restriction-modification mediated barriers to exogenous DNA uptake and incorporation employed by Prevotella intermedia.

Johnston CD, Skeete CA, Fomenkov A, Roberts RJ, Rittling SR.

PLoS One. 2017 Sep 21;12(9):e0185234. doi: 10.1371/journal.pone.0185234. eCollection 2017.


The third restriction-modification system from Thermus aquaticus YT-1: solving the riddle of two TaqII specificities.

Skowron PM, Anton BP, Czajkowska E, Zebrowska J, Sulecka E, Krefft D, Jezewska-Frackowiak J, Zolnierkiewicz O, Witkowska M, Morgan RD, Wilson GG, Fomenkov A, Roberts RJ, Zylicz-Stachula A.

Nucleic Acids Res. 2017 Sep 6;45(15):9005-9018. doi: 10.1093/nar/gkx599.


Whole-Genome Sequence and Methylome Analysis of the Freshwater Colorless Sulfur Bacterium Thioflexothrix psekupsii D3.

Fomenkov A, Vincze T, Grabovich MY, Dubinina G, Orlova M, Belousova E, Roberts RJ.

Genome Announc. 2017 Aug 31;5(35). pii: e00904-17. doi: 10.1128/genomeA.00904-17.


Quality Control of the Traditional Patent Medicine Yimu Wan Based on SMRT Sequencing and DNA Barcoding.

Jia J, Xu Z, Xin T, Shi L, Song J.

Front Plant Sci. 2017 May 31;8:926. doi: 10.3389/fpls.2017.00926. eCollection 2017.


Evaluation of the impact of ul54 gene-deletion on the global transcription and DNA replication of pseudorabies virus.

Csabai Z, Takács IF, Snyder M, Boldogkői Z, Tombácz D.

Arch Virol. 2017 Sep;162(9):2679-2694. doi: 10.1007/s00705-017-3420-3. Epub 2017 Jun 2.


Genomics and Comparative Genomic Analyses Provide Insight into the Taxonomy and Pathogenic Potential of Novel Emmonsia Pathogens.

Yang Y, Ye Q, Li K, Li Z, Bo X, Li Z, Xu Y, Wang S, Wang P, Chen H, Wang J.

Front Cell Infect Microbiol. 2017 Mar 31;7:105. doi: 10.3389/fcimb.2017.00105. eCollection 2017.


Gas fermentation: cellular engineering possibilities and scale up.

Heijstra BD, Leang C, Juminaga A.

Microb Cell Fact. 2017 Apr 12;16(1):60. doi: 10.1186/s12934-017-0676-y. Review.


Complete Genome Sequence and Methylome Analysis of Acinetobacter calcoaceticus 65.

Fomenkov A, Vincze T, Degtyarev SK, Roberts RJ.

Genome Announc. 2017 Mar 23;5(12). pii: e00060-17. doi: 10.1128/genomeA.00060-17.


Complete Genome and Methylome Analysis of Psychrotrophic Bacterial Isolates from Lake Untersee in Antarctica.

Fomenkov A, Akimov VN, Vasilyeva LV, Andersen DT, Vincze T, Roberts RJ.

Genome Announc. 2017 Mar 16;5(11). pii: e01753-16. doi: 10.1128/genomeA.01753-16.


Genetic Adaptation of Porcine Circovirus Type 1 to Cultured Porcine Kidney Cells Revealed by Single-Molecule Long-Read Sequencing Technology.

Tombácz D, Moldován N, Balázs Z, Csabai Z, Snyder M, Boldogkői Z.

Genome Announc. 2017 Feb 2;5(5). pii: e01539-16. doi: 10.1128/genomeA.01539-16.


Genomewide Dam Methylation in Escherichia coli during Long-Term Stationary Phase.

Westphal LL, Sauvey P, Champion MM, Ehrenreich IM, Finkel SE.

mSystems. 2016 Dec 13;1(6). pii: e00130-16. eCollection 2016 Nov-Dec.

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