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Items: 1 to 20 of 73

1.

RNA polymerase gate loop guides the nontemplate DNA strand in transcription complexes.

NandyMazumdar M, Nedialkov Y, Svetlov D, Sevostyanova A, Belogurov GA, Artsimovitch I.

Proc Natl Acad Sci U S A. 2016 Dec 27;113(52):14994-14999. doi: 10.1073/pnas.1613673114.

PMID:
27956639
2.

Colocalization of distant chromosomal loci in space in E. coli: a bacterial nucleolus.

Gaal T, Bratton BP, Sanchez-Vazquez P, Sliwicki A, Sliwicki K, Vegel A, Pannu R, Gourse RL.

Genes Dev. 2016 Oct 15;30(20):2272-2285.

PMID:
27898392
3.
4.

The bacterial enhancer-dependent RNA polymerase.

Zhang N, Darbari VC, Glyde R, Zhang X, Buck M.

Biochem J. 2016 Nov 1;473(21):3741-3753. Review.

5.
6.

Region 4 of Rhizobium etli Primary Sigma Factor (SigA) Confers Transcriptional Laxity in Escherichia coli.

Santillán O, Ramírez-Romero MA, Lozano L, Checa A, Encarnación SM, Dávila G.

Front Microbiol. 2016 Jul 13;7:1078. doi: 10.3389/fmicb.2016.01078.

7.

Inter-sigmulon communication through topological promoter coupling.

Del Peso Santos T, Shingler V.

Nucleic Acids Res. 2016 Nov 16;44(20):9638-9649.

8.

The nature of mutations induced by replication–transcription collisions.

Sankar TS, Wastuwidyaningtyas BD, Dong Y, Lewis SA, Wang JD.

Nature. 2016 Jul 7;535(7610):178-81.

9.

Structures of E. coli σS-transcription initiation complexes provide new insights into polymerase mechanism.

Liu B, Zuo Y, Steitz TA.

Proc Natl Acad Sci U S A. 2016 Apr 12;113(15):4051-6. doi: 10.1073/pnas.1520555113.

10.

Influence of major-groove chemical modifications of DNA on transcription by bacterial RNA polymerases.

Raindlová V, Janoušková M, Slavíčková M, Perlíková P, Boháčová S, Milisavljevič N, Šanderová H, Benda M, Barvík I, Krásný L, Hocek M.

Nucleic Acids Res. 2016 Apr 20;44(7):3000-12. doi: 10.1093/nar/gkw171.

11.

Fluorescence Resonance Energy Transfer Characterization of DNA Wrapping in Closed and Open Escherichia coli RNA Polymerase-λP(R) Promoter Complexes.

Sreenivasan R, Heitkamp S, Chhabra M, Saecker R, Lingeman E, Poulos M, McCaslin D, Capp MW, Artsimovitch I, Record MT Jr.

Biochemistry. 2016 Apr 12;55(14):2174-86. doi: 10.1021/acs.biochem.6b00125.

PMID:
26998673
12.

Open complex scrunching before nucleotide addition accounts for the unusual transcription start site of E. coli ribosomal RNA promoters.

Winkelman JT, Chandrangsu P, Ross W, Gourse RL.

Proc Natl Acad Sci U S A. 2016 Mar 29;113(13):E1787-95. doi: 10.1073/pnas.1522159113.

13.

NusG Is a Sequence-specific RNA Polymerase Pause Factor That Binds to the Non-template DNA within the Paused Transcription Bubble.

Yakhnin AV, Murakami KS, Babitzke P.

J Biol Chem. 2016 Mar 4;291(10):5299-308. doi: 10.1074/jbc.M115.704189.

PMID:
26742846
14.

A model for genesis of transcription systems.

Burton ZF, Opron K, Wei G, Geiger JH.

Transcription. 2016;7(1):1-13. doi: 10.1080/21541264.2015.1128518.

15.

A high density of cis-information terminates RNA Polymerase III on a 2-rail track.

Arimbasseri AG, Maraia RJ.

RNA Biol. 2016;13(2):166-71. doi: 10.1080/15476286.2015.1116677.

16.

Molecular Mechanisms of Transcription Initiation at gal Promoters and their Multi-Level Regulation by GalR, CRP and DNA Loop.

Lewis DE, Adhya S.

Biomolecules. 2015 Oct 16;5(4):2782-807. doi: 10.3390/biom5042782. Review.

17.

Analysis of the leakage of gene repression by an artificial TetR-regulated promoter in cyanobacteria.

Huang HH, Seeger C, Danielson UH, Lindblad P.

BMC Res Notes. 2015 Sep 19;8:459. doi: 10.1186/s13104-015-1425-0.

18.

Structure of a bacterial RNA polymerase holoenzyme open promoter complex.

Bae B, Feklistov A, Lass-Napiorkowska A, Landick R, Darst SA.

Elife. 2015 Sep 8;4. doi: 10.7554/eLife.08504.

19.

TRANSCRIPTION. Structures of the RNA polymerase-σ54 reveal new and conserved regulatory strategies.

Yang Y, Darbari VC, Zhang N, Lu D, Glyde R, Wang YP, Winkelman JT, Gourse RL, Murakami KS, Buck M, Zhang X.

Science. 2015 Aug 21;349(6250):882-5. doi: 10.1126/science.aab1478.

20.

TRANSCRIPTION. Allosteric transcriptional regulation via changes in the overall topology of the core promoter.

Philips SJ, Canalizo-Hernandez M, Yildirim I, Schatz GC, Mondragón A, O'Halloran TV.

Science. 2015 Aug 21;349(6250):877-81. doi: 10.1126/science.aaa9809.

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