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Items: 1 to 20 of 25


Identification of New Features from Known Bacterial Protective Vaccine Antigens Enhances Rational Vaccine Design.

Ong E, Wong MU, He Y.

Front Immunol. 2017 Oct 26;8:1382. doi: 10.3389/fimmu.2017.01382. eCollection 2017.


Peculiar Genes Selection: A new features selection method to improve classification performances in imbalanced data sets.

Martina F, Beccuti M, Balbo G, Cordero F.

PLoS One. 2017 Aug 14;12(8):e0177475. doi: 10.1371/journal.pone.0177475. eCollection 2017.


Computational Identification and Characterization of a Promiscuous T-Cell Epitope on the Extracellular Protein 85B of Mycobacterium spp. for Peptide-Based Subunit Vaccine Design.

Hossain MS, Azad AK, Chowdhury PA, Wakayama M.

Biomed Res Int. 2017;2017:4826030. doi: 10.1155/2017/4826030. Epub 2017 Mar 16.


Antibiotic Resistance Determinant-Focused Acinetobacter baumannii Vaccine Designed Using Reverse Vaccinology.

Ni Z, Chen Y, Ong E, He Y.

Int J Mol Sci. 2017 Feb 21;18(2). pii: E458. doi: 10.3390/ijms18020458.


Post-Genomics and Vaccine Improvement for Leishmania.

Seyed N, Taheri T, Rafati S.

Front Microbiol. 2016 Apr 6;7:467. doi: 10.3389/fmicb.2016.00467. eCollection 2016. Review.


Genome-Wide Prediction of Vaccine Candidates for Leishmania major: An Integrated Approach.

Singh SP, Roopendra K, Mishra BN.

J Trop Med. 2015;2015:709216. doi: 10.1155/2015/709216. Epub 2015 Nov 23.


Immunization with individual proteins of the Lrp/AsnC family induces protection against Brucella melitensis 16M challenges in mice.

Wang X, An C, Yang M, Li X, Ke Y, Lei S, Xu X, Yu J, Ren H, Du X, Wang Z, Qiu Y, Liu B, Chen Z.

Front Microbiol. 2015 Oct 29;6:1193. doi: 10.3389/fmicb.2015.01193. eCollection 2015.


Vaxvec: The first web-based recombinant vaccine vector database and its data analysis.

Deng S, Martin C, Patil R, Zhu F, Zhao B, Xiang Z, He Y.

Vaccine. 2015 Nov 27;33(48):6938-46. doi: 10.1016/j.vaccine.2015.07.113. Epub 2015 Sep 25.


DNAVaxDB: the first web-based DNA vaccine database and its data analysis.

Racz R, Li X, Patel M, Xiang Z, He Y.

BMC Bioinformatics. 2014;15 Suppl 4:S2. doi: 10.1186/1471-2105-15-S4-S2. Epub 2014 Mar 19.


Ontology-supported research on vaccine efficacy, safety and integrative biological networks.

He Y.

Expert Rev Vaccines. 2014 Jul;13(7):825-41. doi: 10.1586/14760584.2014.923762. Epub 2014 Jun 7. Review.


Mature Epitope Density--a strategy for target selection based on immunoinformatics and exported prokaryotic proteins.

Santos AR, Pereira VB, Barbosa E, Baumbach J, Pauling J, Röttger R, Turk MZ, Silva A, Miyoshi A, Azevedo V.

BMC Genomics. 2013;14 Suppl 6:S4. doi: 10.1186/1471-2164-14-S6-S4. Epub 2013 Oct 25.


Vaccine adjuvant informatics: from data integration and analysis to rational vaccine adjuvant design.

He Y.

Front Immunol. 2014 Feb 3;5:32. doi: 10.3389/fimmu.2014.00032. eCollection 2014. No abstract available.


Updates on the web-based VIOLIN vaccine database and analysis system.

He Y, Racz R, Sayers S, Lin Y, Todd T, Hur J, Li X, Patel M, Zhao B, Chung M, Ostrow J, Sylora A, Dungarani P, Ulysse G, Kochhar K, Vidri B, Strait K, Jourdian GW, Xiang Z.

Nucleic Acids Res. 2014 Jan;42(Database issue):D1124-32. doi: 10.1093/nar/gkt1133. Epub 2013 Nov 19.


PolyCTLDesigner: a computational tool for constructing polyepitope T-cell antigens.

Antonets DV, Bazhan SI.

BMC Res Notes. 2013 Oct 10;6:407. doi: 10.1186/1756-0500-6-407.


High-throughput Peptide epitope mapping using carbon nanotube field-effect transistors.

Stefansson S, Knight M, Kwon HH, Stefansson LA, Ahn SN.

Int J Pept. 2013;2013:849303. doi: 10.1155/2013/849303. Epub 2013 Jul 14.


Vaccinomics, adversomics, and the immune response network theory: individualized vaccinology in the 21st century.

Poland GA, Kennedy RB, McKinney BA, Ovsyannikova IG, Lambert ND, Jacobson RM, Oberg AL.

Semin Immunol. 2013 Apr;25(2):89-103. doi: 10.1016/j.smim.2013.04.007. Epub 2013 Jun 5. Review.


Genome-wide prediction of vaccine targets for human herpes simplex viruses using Vaxign reverse vaccinology.

Xiang Z, He Y.

BMC Bioinformatics. 2013;14 Suppl 4:S2. doi: 10.1186/1471-2105-14-S4-S2. Epub 2013 Mar 8.


Computational vaccinology and the ICoVax 2012 workshop.

He Y, Cao Z, De Groot AS, Brusic V, Schönbach C, Petrovsky N.

BMC Bioinformatics. 2013;14 Suppl 4:I1. doi: 10.1186/1471-2105-14-S4-I1. Epub 2013 Mar 8.

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