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Items: 1 to 20 of 48


Novel perspectives on the role of the human microbiota in regenerative medicine and surgery.

Pellegatta T, Saler M, Bonfanti V, Nicoletti G, Faga A.

Biomed Rep. 2016 Nov;5(5):519-524.


Lateral Gene Transfer in a Heavy Metal-Contaminated-Groundwater Microbial Community.

Hemme CL, Green SJ, Rishishwar L, Prakash O, Pettenato A, Chakraborty R, Deutschbauer AM, Van Nostrand JD, Wu L, He Z, Jordan IK, Hazen TC, Arkin AP, Kostka JE, Zhou J.

MBio. 2016 Apr 5;7(2):e02234-15. doi: 10.1128/mBio.02234-15.


Alignment behaviors of short peptides provide a roadmap for functional profiling of metagenomic data.

Sinha R, Clarke J, Benson AK.

BMC Genomics. 2015 Dec 21;16:1080. doi: 10.1186/s12864-015-2272-z.


Metagenomic Human Repiratory Air in a Hospital Environment.

Lai YY, Li Y, Lang J, Tong X, Zhang L, Fang J, Xing J, Cai M, Xu H, Deng Y, Xiao F, Tian G.

PLoS One. 2015 Oct 2;10(10):e0139044. doi: 10.1371/journal.pone.0139044. Retraction in: PLoS One. 2016;11(1):e0147243.


From cultured to uncultured genome sequences: metagenomics and modeling microbial ecosystems.

Garza DR, Dutilh BE.

Cell Mol Life Sci. 2015 Nov;72(22):4287-308. doi: 10.1007/s00018-015-2004-1. Review.


Nature is (a) mine: conceptions of nature in the Dutch ecogenomics community.

Van der Hout S.

Life Sci Soc Policy. 2014 Dec;10:10. doi: 10.1186/s40504-014-0010-y.


Expression of heterologous sigma factors enables functional screening of metagenomic and heterologous genomic libraries.

Gaida SM, Sandoval NR, Nicolaou SA, Chen Y, Venkataramanan KP, Papoutsakis ET.

Nat Commun. 2015 May 6;6:7045. doi: 10.1038/ncomms8045.


CoMeta: classification of metagenomes using k-mers.

Kawulok J, Deorowicz S.

PLoS One. 2015 Apr 17;10(4):e0121453. doi: 10.1371/journal.pone.0121453.


Whole-genome sequencing in outbreak analysis.

Gilchrist CA, Turner SD, Riley MF, Petri WA Jr, Hewlett EL.

Clin Microbiol Rev. 2015 Jul;28(3):541-63. doi: 10.1128/CMR.00075-13. Review.


A two-phase binning algorithm using l-mer frequency on groups of non-overlapping reads.

Vinh le V, Lang TV, Binh le T, Hoai TV.

Algorithms Mol Biol. 2015 Jan 16;10(1):2. doi: 10.1186/s13015-014-0030-4.


Methodology and Ontology in Microbiome Research.

Huss J.

Biol Theory. 2014;9(4):392-400.


Emergent biosynthetic capacity in simple microbial communities.

Chiu HC, Levy R, Borenstein E.

PLoS Comput Biol. 2014 Jul 3;10(7):e1003695. doi: 10.1371/journal.pcbi.1003695.


Biotechnology of polyketides: new breath of life for the novel antibiotic genetic pathways discovery through metagenomics.

Gomes ES, Schuch V, de Macedo Lemos EG.

Braz J Microbiol. 2014 Mar 10;44(4):1007-34. Review.


Microbial ecology of the skin in the era of metagenomics and molecular microbiology.

Hannigan GD, Grice EA.

Cold Spring Harb Perspect Med. 2013 Dec 1;3(12):a015362. doi: 10.1101/cshperspect.a015362. Review.


Microbial diversity in the era of omic technologies.

Nikolaki S, Tsiamis G.

Biomed Res Int. 2013;2013:958719. doi: 10.1155/2013/958719. Review.


Microbes, metagenomes and marine mammals: enabling the next generation of scientist to enter the genomic era.

Edwards RA, Haggerty JM, Cassman N, Busch JC, Aguinaldo K, Chinta S, Vaughn MH, Morey R, Harkins TT, Teiling C, Fredrikson K, Dinsdale EA.

BMC Genomics. 2013 Sep 4;14:600. doi: 10.1186/1471-2164-14-600.


The environment within: exploring the role of the gut microbiome in health and disease.

Konkel L.

Environ Health Perspect. 2013 Sep;121(9):A276-81. doi: 10.1289/ehp.121-A276. No abstract available.


Random sampling process leads to overestimation of β-diversity of microbial communities.

Zhou J, Jiang YH, Deng Y, Shi Z, Zhou BY, Xue K, Wu L, He Z, Yang Y.

MBio. 2013 Jun 11;4(3):e00324-13. doi: 10.1128/mBio.00324-13.

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