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Peculiarities of Yeasts and Human Telomerase RNAs Processing.

Rubtsova MP, Vasilkova DP, Naraykina YV, Dontsova OA.

Acta Naturae. 2016 Oct-Dec;8(4):14-22.


Molecular basis for cytoplasmic RNA surveillance by uridylation-triggered decay in Drosophila.

Reimão-Pinto MM, Manzenreither RA, Burkard TR, Sledz P, Jinek M, Mechtler K, Ameres SL.

EMBO J. 2016 Nov 15;35(22):2417-2434. Epub 2016 Oct 11.


Maf1-mediated regulation of yeast RNA polymerase III is correlated with CCA addition at the 3' end of tRNA precursors.

Foretek D, Nuc P, Żywicki M, Karlowski WM, Kudla G, Boguta M.

Gene. 2017 May 15;612:12-18. doi: 10.1016/j.gene.2016.08.033. Epub 2016 Aug 27.


Coupling between the DEAD-box RNA helicases Ded1p and eIF4A.

Gao Z, Putnam AA, Bowers HA, Guenther UP, Ye X, Kindsfather A, Hilliker AK, Jankowsky E.

Elife. 2016 Aug 5;5. pii: e16408. doi: 10.7554/eLife.16408.


Global analysis of transcriptionally engaged yeast RNA polymerase III reveals extended tRNA transcripts.

Turowski TW, Leśniewska E, Delan-Forino C, Sayou C, Boguta M, Tollervey D.

Genome Res. 2016 Jul;26(7):933-44. doi: 10.1101/gr.205492.116. Epub 2016 May 20.


Mutations in Mtr4 Structural Domains Reveal Their Important Role in Regulating tRNAiMet Turnover in Saccharomyces cerevisiae and Mtr4p Enzymatic Activities In Vitro.

Li Y, Burclaff J, Anderson JT.

PLoS One. 2016 Jan 28;11(1):e0148090. doi: 10.1371/journal.pone.0148090. eCollection 2016.


Sequencing of lariat termini in S. cerevisiae reveals 5' splice sites, branch points, and novel splicing events.

Qin D, Huang L, Wlodaver A, Andrade J, Staley JP.

RNA. 2016 Feb;22(2):237-53. doi: 10.1261/rna.052829.115. Epub 2015 Dec 8.


Suppressor of sable [Su(s)] and Wdr82 down-regulate RNA from heat-shock-inducible repetitive elements by a mechanism that involves transcription termination.

Brewer-Jensen P, Wilson CB, Abernethy J, Mollison L, Card S, Searles LL.

RNA. 2016 Jan;22(1):139-54. doi: 10.1261/rna.048819.114. Epub 2015 Nov 17.


The fission yeast MTREC complex targets CUTs and unspliced pre-mRNAs to the nuclear exosome.

Zhou Y, Zhu J, Schermann G, Ohle C, Bendrin K, Sugioka-Sugiyama R, Sugiyama T, Fischer T.

Nat Commun. 2015 May 20;6:7050. doi: 10.1038/ncomms8050.


Termination of Transcription of Short Noncoding RNAs by RNA Polymerase II.

Arndt KM, Reines D.

Annu Rev Biochem. 2015;84:381-404. doi: 10.1146/annurev-biochem-060614-034457. Epub 2015 Mar 26. Review.


Conserved RNA-binding proteins required for dendrite morphogenesis in Caenorhabditis elegans sensory neurons.

Antonacci S, Forand D, Wolf M, Tyus C, Barney J, Kellogg L, Simon MA, Kerr G, Wells KL, Younes S, Mortimer NT, Olesnicky EC, Killian DJ.

G3 (Bethesda). 2015 Feb 10;5(4):639-53. doi: 10.1534/g3.115.017327.


Interaction between the RNA-dependent ATPase and poly(A) polymerase subunits of the TRAMP complex is mediated by short peptides and important for snoRNA processing.

Losh JS, King AK, Bakelar J, Taylor L, Loomis J, Rosenzweig JA, Johnson SJ, van Hoof A.

Nucleic Acids Res. 2015 Feb 18;43(3):1848-58.


From end to end: tRNA editing at 5'- and 3'-terminal positions.

Betat H, Long Y, Jackman JE, Mörl M.

Int J Mol Sci. 2014 Dec 22;15(12):23975-98. doi: 10.3390/ijms151223975. Review.


The Mtr4 ratchet helix and arch domain both function to promote RNA unwinding.

Taylor LL, Jackson RN, Rexhepaj M, King AK, Lott LK, van Hoof A, Johnson SJ.

Nucleic Acids Res. 2014 Dec 16;42(22):13861-72. doi: 10.1093/nar/gku1208. Epub 2014 Nov 20.


Potential conservation of circadian clock proteins in the phylum Nematoda as revealed by bioinformatic searches.

Romanowski A, Garavaglia MJ, Goya ME, Ghiringhelli PD, Golombek DA.

PLoS One. 2014 Nov 14;9(11):e112871. doi: 10.1371/journal.pone.0112871. eCollection 2014.


Molecular basis for coordinating transcription termination with noncoding RNA degradation.

Tudek A, Porrua O, Kabzinski T, Lidschreiber M, Kubicek K, Fortova A, Lacroute F, Vanacova S, Cramer P, Stefl R, Libri D.

Mol Cell. 2014 Aug 7;55(3):467-81. doi: 10.1016/j.molcel.2014.05.031. Epub 2014 Jul 24.


Certain adenylated non-coding RNAs, including 5' leader sequences of primary microRNA transcripts, accumulate in mouse cells following depletion of the RNA helicase MTR4.

Dorweiler JE, Ni T, Zhu J, Munroe SH, Anderson JT.

PLoS One. 2014 Jun 13;9(6):e99430. doi: 10.1371/journal.pone.0099430. eCollection 2014.


RNA helicase proteins as chaperones and remodelers.

Jarmoskaite I, Russell R.

Annu Rev Biochem. 2014;83:697-725. doi: 10.1146/annurev-biochem-060713-035546. Epub 2014 Mar 12. Review.


Visualization of distinct substrate-recruitment pathways in the yeast exosome by EM.

Liu JJ, Bratkowski MA, Liu X, Niu CY, Ke A, Wang HW.

Nat Struct Mol Biol. 2014 Jan;21(1):95-102. doi: 10.1038/nsmb.2736. Epub 2013 Dec 15.


Cotranscriptional recruitment of yeast TRAMP complex to intronic sequences promotes optimal pre-mRNA splicing.

Kong KY, Tang HM, Pan K, Huang Z, Lee TH, Hinnebusch AG, Jin DY, Wong CM.

Nucleic Acids Res. 2014 Jan;42(1):643-60. doi: 10.1093/nar/gkt888. Epub 2013 Oct 3.

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