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Items: 1 to 20 of 204


Detecting TF-miRNA-gene network based modules for 5hmC and 5mC brain samples: a intra- and inter-species case-study between human and rhesus.

Maulik U, Sen S, Mallik S, Bandyopadhyay S.

BMC Genet. 2018 Jan 22;19(1):9. doi: 10.1186/s12863-017-0574-7.


Analysis of DNA modifications in aging research.

Masser DR, Hadad N, Porter H, Stout MB, Unnikrishnan A, Stanford DR, Freeman WM.

Geroscience. 2018 Feb;40(1):11-29. doi: 10.1007/s11357-018-0005-3. Epub 2018 Jan 11. Review.


Lung function discordance in monozygotic twins and associated differences in blood DNA methylation.

Bolund ACS, Starnawska A, Miller MR, Schlünssen V, Backer V, Børglum AD, Christensen K, Tan Q, Christiansen L, Sigsgaard T.

Clin Epigenetics. 2017 Dec 21;9:132. doi: 10.1186/s13148-017-0427-2. eCollection 2017.


A method for the efficient and selective identification of 5-hydroxymethyluracil in genomic DNA.

Bullard W, Kieft R, Sabatini R.

Biol Methods Protoc. 2017 Jan;2(1). pii: bpw006. doi: 10.1093/biomethods/bpw006. Epub 2017 Jan 25.


Unlinking the methylome pattern from nucleotide sequence, revealed by large-scale in vivo genome engineering and methylome editing in medaka fish.

Cheung NKM, Nakamura R, Uno A, Kumagai M, Fukushima HS, Morishita S, Takeda H.

PLoS Genet. 2017 Dec 21;13(12):e1007123. doi: 10.1371/journal.pgen.1007123. eCollection 2017 Dec.


TET proteins safeguard bivalent promoters from de novo methylation in human embryonic stem cells.

Verma N, Pan H, Doré LC, Shukla A, Li QV, Pelham-Webb B, Teijeiro V, González F, Krivtsov A, Chang CJ, Papapetrou EP, He C, Elemento O, Huangfu D.

Nat Genet. 2018 Jan;50(1):83-95. doi: 10.1038/s41588-017-0002-y. Epub 2017 Dec 4. Erratum in: Nat Genet. 2017 Dec 18;:. Nat Genet. 2017 Dec 18;:.


Oxygen gradients can determine epigenetic asymmetry and cellular differentiation via differential regulation of Tet activity in embryonic stem cells.

Burr S, Caldwell A, Chong M, Beretta M, Metcalf S, Hancock M, Arno M, Balu S, Kropf VL, Mistry RK, Shah AM, Mann GE, Brewer AC.

Nucleic Acids Res. 2018 Feb 16;46(3):1210-1226. doi: 10.1093/nar/gkx1197.


Dynamic transcriptome and DNA methylome analyses on longissimus dorsi to identify genes underlying intramuscular fat content in pigs.

Wang Y, Ma C, Sun Y, Li Y, Kang L, Jiang Y.

BMC Genomics. 2017 Oct 12;18(1):780. doi: 10.1186/s12864-017-4201-9.


Tet-mediated DNA hydroxymethylation regulates retinal neurogenesis by modulating cell-extrinsic signaling pathways.

Seritrakul P, Gross JM.

PLoS Genet. 2017 Sep 19;13(9):e1006987. doi: 10.1371/journal.pgen.1006987. eCollection 2017 Sep.


Bi-directional and shared epigenomic signatures following proton and 56Fe irradiation.

Impey S, Jopson T, Pelz C, Tafessu A, Fareh F, Zuloaga D, Marzulla T, Riparip LK, Stewart B, Rosi S, Turker MS, Raber J.

Sci Rep. 2017 Aug 31;7(1):10227. doi: 10.1038/s41598-017-09191-4.


An epigenetic switch repressing Tet1 in gonadotropes activates the reproductive axis.

Yosefzon Y, David C, Tsukerman A, Pnueli L, Qiao S, Boehm U, Melamed P.

Proc Natl Acad Sci U S A. 2017 Sep 19;114(38):10131-10136. doi: 10.1073/pnas.1704393114. Epub 2017 Aug 30.


DEMETER plant DNA demethylase induces antiviral response by interferon signalling in animal cells.

Mok YG, Choi KY, Hong SH, Huh JH.

Sci Rep. 2017 Aug 22;7(1):9160. doi: 10.1038/s41598-017-08827-9.


Epigenetics in SLE.

Hedrich CM.

Curr Rheumatol Rep. 2017 Sep;19(9):58. doi: 10.1007/s11926-017-0685-1. Review.


Single-molecule quantification of 5-hydroxymethylcytosine for diagnosis of blood and colon cancers.

Gilat N, Tabachnik T, Shwartz A, Shahal T, Torchinsky D, Michaeli Y, Nifker G, Zirkin S, Ebenstein Y.

Clin Epigenetics. 2017 Jul 14;9:70. doi: 10.1186/s13148-017-0368-9. eCollection 2017.


TET1-mediated DNA hypomethylation regulates the expression of MUC4 in lung cancer.

Yokoyama S, Higashi M, Tsutsumida H, Wakimoto J, Hamada T, Wiest E, Matsuo K, Kitazono I, Goto Y, Guo X, Hamada T, Yamada S, Hiraki T, Yonezawa S, Batra SK, Hollingsworth MA, Tanimoto A.

Genes Cancer. 2017 Mar;8(3-4):517-527. doi: 10.18632/genesandcancer.139.


Vitamin C in Stem Cell Biology: Impact on Extracellular Matrix Homeostasis and Epigenetics.

D'Aniello C, Cermola F, Patriarca EJ, Minchiotti G.

Stem Cells Int. 2017;2017:8936156. doi: 10.1155/2017/8936156. Epub 2017 Apr 20. Review.


LC-MS-MS quantitative analysis reveals the association between FTO and DNA methylation.

Zhu Y, Zhou G, Yu X, Xu Q, Wang K, Xie D, Yang Q, Wang L.

PLoS One. 2017 Apr 28;12(4):e0175849. doi: 10.1371/journal.pone.0175849. eCollection 2017.


Methyl-CpG binding domain protein 1 regulates localization and activity of Tet1 in a CXXC3 domain-dependent manner.

Zhang P, Rausch C, Hastert FD, Boneva B, Filatova A, Patil SJ, Nuber UA, Gao Y, Zhao X, Cardoso MC.

Nucleic Acids Res. 2017 Jul 7;45(12):7118-7136. doi: 10.1093/nar/gkx281.


Site-specific recruitment of epigenetic factors with a modular CRISPR/Cas system.

Anton T, Bultmann S.

Nucleus. 2017 May 4;8(3):279-286. doi: 10.1080/19491034.2017.1292194. Epub 2017 Feb 23.


Epigenetic regulator CXXC5 recruits DNA demethylase Tet2 to regulate TLR7/9-elicited IFN response in pDCs.

Ma S, Wan X, Deng Z, Shi L, Hao C, Zhou Z, Zhou C, Fang Y, Liu J, Yang J, Chen X, Li T, Zang A, Yin S, Li B, Plumas J, Chaperot L, Zhang X, Xu G, Jiang L, Shen N, Xiong S, Gao X, Zhang Y, Xiao H.

J Exp Med. 2017 May 1;214(5):1471-1491. doi: 10.1084/jem.20161149. Epub 2017 Apr 17.

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