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Items: 1 to 20 of 49


Disease Compass- a navigation system for disease knowledge based on ontology and linked data techniques.

Kozaki K, Yamagata Y, Mizoguchi R, Imai T, Ohe K.

J Biomed Semantics. 2017 Jun 19;8(1):22. doi: 10.1186/s13326-017-0132-2.


Semantic Health Knowledge Graph: Semantic Integration of Heterogeneous Medical Knowledge and Services.

Shi L, Li S, Yang X, Qi J, Pan G, Zhou B.

Biomed Res Int. 2017;2017:2858423. doi: 10.1155/2017/2858423. Epub 2017 Feb 12.


Building a model for disease classification integration in oncology, an approach based on the national cancer institute thesaurus.

Jouhet V, Mougin F, Bréchat B, Thiessard F.

J Biomed Semantics. 2017 Feb 7;8(1):6. doi: 10.1186/s13326-017-0114-4.


An ontological analysis of medical Bayesian indicators of performance.

Barton A, Ethier JF, Duvauferrier R, Burgun A.

J Biomed Semantics. 2017 Jan 3;8(1):1. doi: 10.1186/s13326-016-0099-4.


Diagnosis, misdiagnosis, lucky guess, hearsay, and more: an ontological analysis.

Hogan WR, Ceusters W.

J Biomed Semantics. 2016 Sep 15;7(1):54. doi: 10.1186/s13326-016-0098-5.


The Apollo Structured Vocabulary: an OWL2 ontology of phenomena in infectious disease epidemiology and population biology for use in epidemic simulation.

Hogan WR, Wagner MM, Brochhausen M, Levander J, Brown ST, Millett N, DePasse J, Hanna J.

J Biomed Semantics. 2016 Aug 18;7:50. doi: 10.1186/s13326-016-0092-y.


DermO; an ontology for the description of dermatologic disease.

Fisher HM, Hoehndorf R, Bazelato BS, Dadras SS, King LE Jr, Gkoutos GV, Sundberg JP, Schofield PN.

J Biomed Semantics. 2016 Jun 13;7:38. doi: 10.1186/s13326-016-0085-x.


Representing vision and blindness.

Ray PL, Cox AP, Jensen M, Allen T, Duncan W, Diehl AD.

J Biomed Semantics. 2016 Mar 30;7:15. doi: 10.1186/s13326-016-0058-0. eCollection 2016.


Linking MedDRA(®)-Coded Clinical Phenotypes to Biological Mechanisms by the Ontology of Adverse Events: A Pilot Study on Tyrosine Kinase Inhibitors.

Sarntivijai S, Zhang S, Jagannathan DG, Zaman S, Burkhart KK, Omenn GS, He Y, Athey BD, Abernethy DR.

Drug Saf. 2016 Jul;39(7):697-707. doi: 10.1007/s40264-016-0414-0.


POETenceph - Automatic identification of clinical notes indicating encephalopathy using a realist ontology.

Doing-Harris KM, Weir CR, Igo S, Shi J, Shao Y, Hurdle JF.

AMIA Annu Symp Proc. 2015 Nov 5;2015:512-21. eCollection 2015.


Perspectives on next steps in classification of oro-facial pain - part 2: role of psychosocial factors.

Durham J, Raphael KG, Benoliel R, Ceusters W, Michelotti A, Ohrbach R.

J Oral Rehabil. 2015 Dec;42(12):942-55. doi: 10.1111/joor.12329. Epub 2015 Aug 8. Review.


Perspectives on next steps in classification of oro-facial pain - part 1: role of ontology.

Ceusters W, Michelotti A, Raphael KG, Durham J, Ohrbach R.

J Oral Rehabil. 2015 Dec;42(12):926-41. doi: 10.1111/joor.12336. Epub 2015 Jul 25. Review.


Perspectives on next steps in classification of oro-facial pain - Part 3: biomarkers of chronic oro-facial pain - from research to clinic.

Ceusters W, Nasri-Heir C, Alnaas D, Cairns BE, Michelotti A, Ohrbach R.

J Oral Rehabil. 2015 Dec;42(12):956-66. doi: 10.1111/joor.12324. Epub 2015 Jul 22. Review.


An ontology for Autism Spectrum Disorder (ASD) to infer ASD phenotypes from Autism Diagnostic Interview-Revised data.

Mugzach O, Peleg M, Bagley SC, Guter SJ, Cook EH, Altman RB.

J Biomed Inform. 2015 Aug;56:333-47. doi: 10.1016/j.jbi.2015.06.026. Epub 2015 Jul 4.


OAE: The Ontology of Adverse Events.

He Y, Sarntivijai S, Lin Y, Xiang Z, Guo A, Zhang S, Jagannathan D, Toldo L, Tao C, Smith B.

J Biomed Semantics. 2014 Jul 5;5:29. doi: 10.1186/2041-1480-5-29. eCollection 2014.


The ontology of genetic susceptibility factors (OGSF) and its application in modeling genetic susceptibility to vaccine adverse events.

Lin Y, He Y.

J Biomed Semantics. 2014 Apr 30;5:19. doi: 10.1186/2041-1480-5-19. eCollection 2014.


An ontological modeling approach for abnormal states and its application in the medical domain.

Yamagata Y, Kozaki K, Imai T, Ohe K, Mizoguchi R.

J Biomed Semantics. 2014 May 21;5:23. doi: 10.1186/2041-1480-5-23. eCollection 2014.


The neurological disease ontology.

Jensen M, Cox AP, Chaudhry N, Ng M, Sule D, Duncan W, Ray P, Weinstock-Guttman B, Smith B, Ruttenberg A, Szigeti K, Diehl AD.

J Biomed Semantics. 2013 Dec 6;4(1):42. doi: 10.1186/2041-1480-4-42.


An ontology-based method for secondary use of electronic dental record data.

Schleyer TK, Ruttenberg A, Duncan W, Haendel M, Torniai C, Acharya A, Song M, Thyvalikakath TP, Liu K, Hernandez P.

AMIA Jt Summits Transl Sci Proc. 2013 Mar 18;2013:234-8. eCollection 2013.


Learning to recognize phenotype candidates in the auto-immune literature using SVM re-ranking.

Collier N, Tran MV, Le HQ, Ha QT, Oellrich A, Rebholz-Schuhmann D.

PLoS One. 2013 Oct 14;8(10):e72965. doi: 10.1371/journal.pone.0072965. eCollection 2013.

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