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Items: 19

1.

Analysis of chromatin accessibility in human epidermis identifies putative barrier dysfunction-sensing enhancers.

Lander JM, Supp DM, He H, Martin LJ, Chen X, Weirauch MT, Boyce ST, Kopan R.

PLoS One. 2017 Sep 27;12(9):e0184500. doi: 10.1371/journal.pone.0184500. eCollection 2017.

2.

Panx3 links body mass index and tumorigenesis in a genetically heterogeneous mouse model of carcinogen-induced cancer.

Halliwill KD, Quigley DA, Kang HC, Del Rosario R, Ginzinger D, Balmain A.

Genome Med. 2016 Aug 9;8(1):83. doi: 10.1186/s13073-016-0334-8.

3.

Gene Expression Architecture of Mouse Dorsal and Tail Skin Reveals Functional Differences in Inflammation and Cancer.

Quigley DA, Kandyba E, Huang P, Halliwill KD, Sjölund J, Pelorosso F, Wong CE, Hirst GL, Wu D, Delrosario R, Kumar A, Balmain A.

Cell Rep. 2016 Jul 26;16(4):1153-1165. doi: 10.1016/j.celrep.2016.06.061. Epub 2016 Jul 14.

4.

Molecular and genetic inflammation networks in major human diseases.

Zhao Y, Forst CV, Sayegh CE, Wang IM, Yang X, Zhang B.

Mol Biosyst. 2016 Jul 19;12(8):2318-41. doi: 10.1039/c6mb00240d. Review.

5.

HZE Radiation Non-Targeted Effects on the Microenvironment That Mediate Mammary Carcinogenesis.

Barcellos-Hoff MH, Mao JH.

Front Oncol. 2016 Mar 11;6:57. doi: 10.3389/fonc.2016.00057. eCollection 2016. Review.

6.

Evolution of metastasis revealed by mutational landscapes of chemically induced skin cancers.

McCreery MQ, Halliwill KD, Chin D, Delrosario R, Hirst G, Vuong P, Jen KY, Hewinson J, Adams DJ, Balmain A.

Nat Med. 2015 Dec;21(12):1514-20. doi: 10.1038/nm.3979. Epub 2015 Nov 2.

7.

Equalizer reduces SNP bias in Affymetrix microarrays.

Quigley D.

BMC Bioinformatics. 2015 Jul 30;16:238. doi: 10.1186/s12859-015-0669-y.

8.

Systematic genetic analysis identifies Cis-eQTL target genes associated with glioblastoma patient survival.

Chen QR, Hu Y, Yan C, Buetow K, Meerzaman D.

PLoS One. 2014 Aug 18;9(8):e105393. doi: 10.1371/journal.pone.0105393. eCollection 2014.

9.

The developing story of Sprouty and cancer.

Masoumi-Moghaddam S, Amini A, Morris DL.

Cancer Metastasis Rev. 2014 Sep;33(2-3):695-720. doi: 10.1007/s10555-014-9497-1. Review.

10.

Hair follicle disruption facilitates pathogenesis to UVB-induced cutaneous inflammation and basal cell carcinoma development in Ptch(+/-) mice.

Xu J, Weng Z, Arumugam A, Tang X, Chaudhary SC, Li C, Christiano AM, Elmets CA, Bickers DR, Athar M.

Am J Pathol. 2014 May;184(5):1529-40. doi: 10.1016/j.ajpath.2014.01.013. Epub 2014 Mar 12.

11.

Transcriptome analysis of psoriasis in a large case-control sample: RNA-seq provides insights into disease mechanisms.

Li B, Tsoi LC, Swindell WR, Gudjonsson JE, Tejasvi T, Johnston A, Ding J, Stuart PE, Xing X, Kochkodan JJ, Voorhees JJ, Kang HM, Nair RP, Abecasis GR, Elder JT.

J Invest Dermatol. 2014 Jul;134(7):1828-1838. doi: 10.1038/jid.2014.28. Epub 2014 Jan 17.

12.

The 5p12 breast cancer susceptibility locus affects MRPS30 expression in estrogen-receptor positive tumors.

Quigley DA, Fiorito E, Nord S, Van Loo P, Alnæs GG, Fleischer T, Tost J, Moen Vollan HK, Tramm T, Overgaard J, Bukholm IR, Hurtado A, Balmain A, Børresen-Dale AL, Kristensen V.

Mol Oncol. 2014 Mar;8(2):273-84. doi: 10.1016/j.molonc.2013.11.008. Epub 2013 Dec 3.

13.

Using a systems biology approach to understand and study the mechanisms of metastasis.

Ha NH, Hunter KW.

Wiley Interdiscip Rev Syst Biol Med. 2014 Jan-Feb;6(1):107-14. doi: 10.1002/wsbm.1237. Epub 2013 Jul 19. Review.

14.

Rewiring of human lung cell lineage and mitotic networks in lung adenocarcinomas.

Kim IJ, Quigley D, To MD, Pham P, Lin K, Jo B, Jen KY, Raz D, Kim J, Mao JH, Jablons D, Balmain A.

Nat Commun. 2013;4:1701. doi: 10.1038/ncomms2660.

15.

Heterogeneity of gene expression in murine squamous cell carcinoma development-the same tumor by different means.

Cohen N, Kravchenko-Balasha N, Klein S, Levitzki A.

PLoS One. 2013;8(3):e57748. doi: 10.1371/journal.pone.0057748. Epub 2013 Mar 18.

16.

Inflammation and Hras signaling control epithelial-mesenchymal transition during skin tumor progression.

Wong CE, Yu JS, Quigley DA, To MD, Jen KY, Huang PY, Del Rosario R, Balmain A.

Genes Dev. 2013 Mar 15;27(6):670-82. doi: 10.1101/gad.210427.112.

17.

Mathematical and statistical modeling in cancer systems biology.

Blair RH, Trichler DL, Gaille DP.

Front Physiol. 2012 Jun 28;3:227. doi: 10.3389/fphys.2012.00227. eCollection 2012.

18.

On a fundamental structure of gene networks in living cells.

Kravchenko-Balasha N, Levitzki A, Goldstein A, Rotter V, Gross A, Remacle F, Levine RD.

Proc Natl Acad Sci U S A. 2012 Mar 20;109(12):4702-7. doi: 10.1073/pnas.1200790109. Epub 2012 Mar 5.

19.

Progressive genomic instability in the FVB/Kras(LA2) mouse model of lung cancer.

To MD, Quigley DA, Mao JH, Del Rosario R, Hsu J, Hodgson G, Jacks T, Balmain A.

Mol Cancer Res. 2011 Oct;9(10):1339-45. doi: 10.1158/1541-7786.MCR-11-0219. Epub 2011 Aug 1.

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