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Items: 1 to 20 of 60

1.

Exploration of charge states of balanol analogues acting as ATP-competitive inhibitors in kinases.

Hardianto A, Yusuf M, Liu F, Ranganathan S.

BMC Bioinformatics. 2017 Dec 28;18(Suppl 16):572. doi: 10.1186/s12859-017-1955-7.

2.

Structure of a Thermobifida fusca lytic polysaccharide monooxygenase and mutagenesis of key residues.

Kruer-Zerhusen N, Alahuhta M, Lunin VV, Himmel ME, Bomble YJ, Wilson DB.

Biotechnol Biofuels. 2017 Nov 30;10:243. doi: 10.1186/s13068-017-0925-7. eCollection 2017.

3.
4.

RCSB Protein Data Bank: Sustaining a living digital data resource that enables breakthroughs in scientific research and biomedical education.

Burley SK, Berman HM, Christie C, Duarte JM, Feng Z, Westbrook J, Young J, Zardecki C.

Protein Sci. 2018 Jan;27(1):316-330. doi: 10.1002/pro.3331. Epub 2017 Nov 11. Review.

5.

JMJD5 cleaves monomethylated histone H3 N-tail under DNA damaging stress.

Shen J, Xiang X, Chen L, Wang H, Wu L, Sun Y, Ma L, Gu X, Liu H, Wang L, Yu YN, Shao J, Huang C, Chin YE.

EMBO Rep. 2017 Dec;18(12):2131-2143. doi: 10.15252/embr.201743892. Epub 2017 Oct 5.

PMID:
28982940
6.

In silico analysis of heme oxygenase structural homologues identifies group-specific conservations.

Irvin J, Ropelewski AJ, Perozich J.

FEBS Open Bio. 2017 Sep 4;7(10):1480-1498. doi: 10.1002/2211-5463.12275. eCollection 2017 Oct.

7.

Structural basis of the interaction between the putative adhesion-involved and iron-regulated FrpD and FrpC proteins of Neisseria meningitidis.

Sviridova E, Rezacova P, Bondar A, Veverka V, Novak P, Schenk G, Svergun DI, Kuta Smatanova I, Bumba L.

Sci Rep. 2017 Jan 13;7:40408. doi: 10.1038/srep40408.

8.

In Search of Functional Advantages of Knots in Proteins.

Dabrowski-Tumanski P, Stasiak A, Sulkowska JI.

PLoS One. 2016 Nov 2;11(11):e0165986. doi: 10.1371/journal.pone.0165986. eCollection 2016.

9.

STN1 OB Fold Mutation Alters DNA Binding and Affects Selective Aspects of CST Function.

Bhattacharjee A, Stewart J, Chaiken M, Price CM.

PLoS Genet. 2016 Sep 30;12(9):e1006342. doi: 10.1371/journal.pgen.1006342. eCollection 2016 Sep.

10.

A network of allosterically coupled residues in the bacteriophage T4 Mre11-Rad50 complex.

Gao Y, Meyer JR, Nelson SW.

Protein Sci. 2016 Nov;25(11):2054-2065. doi: 10.1002/pro.3028. Epub 2016 Sep 16.

11.

A Systematic Analysis of the Structures of Heterologously Expressed Proteins and Those from Their Native Hosts in the RCSB PDB Archive.

Zhou RB, Lu HM, Liu J, Shi JY, Zhu J, Lu QQ, Yin DC.

PLoS One. 2016 Aug 12;11(8):e0161254. doi: 10.1371/journal.pone.0161254. eCollection 2016.

12.

Comparative Protein Structure Modeling Using MODELLER.

Webb B, Sali A.

Curr Protoc Bioinformatics. 2016 Jun 20;54:5.6.1-5.6.37. doi: 10.1002/cpbi.3.

13.

Analysis of nucleotide diphosphate sugar dehydrogenases reveals family and group-specific relationships.

Freas N, Newton P, Perozich J.

FEBS Open Bio. 2016 Jan 11;6(1):77-89. doi: 10.1002/2211-5463.12022. eCollection 2016 Jan.

14.

Identification of a Herbal Powder by Deoxyribonucleic Acid Barcoding and Structural Analyses.

Sheth BP, Thaker VS.

Pharmacogn Mag. 2015 Oct;11(Suppl 4):S570-4. doi: 10.4103/0973-1296.172963.

15.

Systems biology of the structural proteome.

Brunk E, Mih N, Monk J, Zhang Z, O'Brien EJ, Bliven SE, Chen K, Chang RL, Bourne PE, Palsson BO.

BMC Syst Biol. 2016 Mar 11;10:26. doi: 10.1186/s12918-016-0271-6.

16.

Structure and Function of the N-Terminal Domain of the Vesicular Stomatitis Virus RNA Polymerase.

Qiu S, Ogino M, Luo M, Ogino T, Green TJ.

J Virol. 2015 Oct 28;90(2):715-24. doi: 10.1128/JVI.02317-15.

17.

PDB-Explorer: a web-based interactive map of the protein data bank in shape space.

Jin X, Awale M, Zasso M, Kostro D, Patiny L, Reymond JL.

BMC Bioinformatics. 2015 Oct 23;16:339. doi: 10.1186/s12859-015-0776-9.

18.

Eukaryotic G protein-coupled receptors as descendants of prokaryotic sodium-translocating rhodopsins.

Shalaeva DN, Galperin MY, Mulkidjanian AY.

Biol Direct. 2015 Oct 15;10:63. doi: 10.1186/s13062-015-0091-4.

19.

Structural Studies of the HIV-1 Integrase Protein: Compound Screening and Characterization of a DNA-Binding Inhibitor.

Quashie PK, Han YS, Hassounah S, Mesplède T, Wainberg MA.

PLoS One. 2015 Jun 5;10(6):e0128310. doi: 10.1371/journal.pone.0128310. eCollection 2015.

20.

Structural determinants of the interaction between the TpsA and TpsB proteins in the Haemophilus influenzae HMW1 two-partner secretion system.

Grass S, Rempe KA, St Geme JW 3rd.

J Bacteriol. 2015 May;197(10):1769-80. doi: 10.1128/JB.00039-15. Epub 2015 Mar 16.

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