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Items: 1 to 20 of 51

1.

Computational Methods for the Pharmacogenetic Interpretation of Next Generation Sequencing Data.

Zhou Y, Fujikura K, Mkrtchian S, Lauschke VM.

Front Pharmacol. 2018 Dec 4;9:1437. doi: 10.3389/fphar.2018.01437. eCollection 2018. Review.

2.

regQTLs: Single nucleotide polymorphisms that modulate microRNA regulation of gene expression in tumors.

Wilk G, Braun R.

PLoS Genet. 2018 Dec 17;14(12):e1007837. doi: 10.1371/journal.pgen.1007837. eCollection 2018 Dec.

3.

Exploring the Impact of Single-Nucleotide Polymorphisms on Translation.

Robert F, Pelletier J.

Front Genet. 2018 Oct 30;9:507. doi: 10.3389/fgene.2018.00507. eCollection 2018. Review.

4.

miRNA Mediated Noise Making of 3'UTR Mutations in Cancer.

Wu W, Wu L, Zhu M, Wang Z, Wu M, Li P, Nie Y, Lin X, Hu J, Eskilsson E, Wang Q, Shao J, Lyu S.

Genes (Basel). 2018 Nov 12;9(11). pii: E545. doi: 10.3390/genes9110545.

5.

Life-Course Genome-wide Association Study Meta-analysis of Total Body BMD and Assessment of Age-Specific Effects.

Medina-Gomez C, Kemp JP, Trajanoska K, Luan J, Chesi A, Ahluwalia TS, Mook-Kanamori DO, Ham A, Hartwig FP, Evans DS, Joro R, Nedeljkovic I, Zheng HF, Zhu K, Atalay M, Liu CT, Nethander M, Broer L, Porleifsson G, Mullin BH, Handelman SK, Nalls MA, Jessen LE, Heppe DHM, Richards JB, Wang C, Chawes B, Schraut KE, Amin N, Wareham N, Karasik D, Van der Velde N, Ikram MA, Zemel BS, Zhou Y, Carlsson CJ, Liu Y, McGuigan FE, Boer CG, Bønnelykke K, Ralston SH, Robbins JA, Walsh JP, Zillikens MC, Langenberg C, Li-Gao R, Williams FMK, Harris TB, Akesson K, Jackson RD, Sigurdsson G, den Heijer M, van der Eerden BCJ, van de Peppel J, Spector TD, Pennell C, Horta BL, Felix JF, Zhao JH, Wilson SG, de Mutsert R, Bisgaard H, Styrkársdóttir U, Jaddoe VW, Orwoll E, Lakka TA, Scott R, Grant SFA, Lorentzon M, van Duijn CM, Wilson JF, Stefansson K, Psaty BM, Kiel DP, Ohlsson C, Ntzani E, van Wijnen AJ, Forgetta V, Ghanbari M, Logan JG, Williams GR, Bassett JHD, Croucher PI, Evangelou E, Uitterlinden AG, Ackert-Bicknell CL, Tobias JH, Evans DM, Rivadeneira F.

Am J Hum Genet. 2018 Jan 4;102(1):88-102. doi: 10.1016/j.ajhg.2017.12.005.

6.

Identification of rare noncoding sequence variants in gamma-aminobutyric acid A receptor, alpha 4 subunit in autism spectrum disorder.

Griswold AJ, Van Booven D, Cuccaro ML, Haines JL, Gilbert JR, Pericak-Vance MA.

Neurogenetics. 2018 Jan;19(1):17-26. doi: 10.1007/s10048-017-0529-1. Epub 2017 Nov 18.

7.

Association of a 3' untranslated region polymorphism in proprotein convertase subtilisin/kexin type 9 with HIV viral load and CD4+ levels in HIV/hepatitis C virus coinfected women.

Kuniholm MH, Liang H, Anastos K, Gustafson D, Kassaye S, Nowicki M, Sha BE, Pawlowski EJ, Gange SJ, Aouizerat BE, Pushkarsky T, Bukrinsky MI, Prasad VR.

AIDS. 2017 Nov 28;31(18):2483-2492. doi: 10.1097/QAD.0000000000001648.

8.

MSDD: a manually curated database of experimentally supported associations among miRNAs, SNPs and human diseases.

Yue M, Zhou D, Zhi H, Wang P, Zhang Y, Gao Y, Guo M, Li X, Wang Y, Zhang Y, Ning S, Li X.

Nucleic Acids Res. 2018 Jan 4;46(D1):D181-D185. doi: 10.1093/nar/gkx1035.

9.

An Integrating Approach for Genome-Wide Screening of MicroRNA Polymorphisms Mediated Drug Response Alterations.

Wang X, Jiang H, Wu W, Zhang R, Wu L, Chen H, Li P, Nie Y, Shao J, Li Y, Lin X, Lv S, Wang Q, Hu J.

Int J Genomics. 2017;2017:1674827. doi: 10.1155/2017/1674827. Epub 2017 Apr 5.

10.

Molecular mechanisms underlying noncoding risk variations in psychiatric genetic studies.

Xiao X, Chang H, Li M.

Mol Psychiatry. 2017 Apr;22(4):497-511. doi: 10.1038/mp.2016.241. Epub 2017 Jan 3. Review.

11.

A functional polymorphism in the NKG2D gene modulates NK-cell cytotoxicity and is associated with susceptibility to Human Papilloma Virus-related cancers.

Espinoza JL, Nguyen VH, Ichimura H, Pham TT, Nguyen CH, Pham TV, Elbadry MI, Yoshioka K, Tanaka J, Trung LQ, Takami A, Nakao S.

Sci Rep. 2016 Dec 20;6:39231. doi: 10.1038/srep39231.

12.

Relationship of TRIM5 and TRIM22 polymorphisms with liver disease and HCV clearance after antiviral therapy in HIV/HCV coinfected patients.

Medrano LM, Rallón N, Berenguer J, Jiménez-Sousa MA, Soriano V, Aldámiz-Echevarria T, Fernández-Rodríguez A, García M, Tejerina F, Martínez I, Benito JM, Resino S.

J Transl Med. 2016 Sep 2;14:257. doi: 10.1186/s12967-016-1005-7.

13.

A single nucleotide polymorphism in the 3'-UTR of STAT3 regulates its expression and reduces risk of pancreatic cancer in a Chinese population.

Zhu B, Zhu Y, Lou J, Ke J, Zhang Y, Li J, Gong Y, Yang Y, Tian J, Peng X, Zou D, Zhong R, Gong J, Chang J, Li L, Miao X.

Oncotarget. 2016 Sep 20;7(38):62305-62311. doi: 10.18632/oncotarget.11607.

14.

Pedigree based DNA sequencing pipeline for germline genomes of cancer families.

Försti A, Kumar A, Paramasivam N, Schlesner M, Catalano C, Dymerska D, Lubinski J, Eils R, Hemminki K.

Hered Cancer Clin Pract. 2016 Aug 9;14:16. doi: 10.1186/s13053-016-0058-1. eCollection 2016.

15.

Tools for Predicting the Functional Impact of Nonsynonymous Genetic Variation.

Tang H, Thomas PD.

Genetics. 2016 Jun;203(2):635-47. doi: 10.1534/genetics.116.190033. Review.

16.

Association study of MiRSNPs with schizophrenia, tardive dyskinesia and cognition.

John J, Bhatia T, Kukshal P, Chandna P, Nimgaonkar VL, Deshpande SN, Thelma BK.

Schizophr Res. 2016 Jul;174(1-3):29-34. doi: 10.1016/j.schres.2016.03.031. Epub 2016 Apr 19.

17.

Double-strand break repair and colorectal cancer: gene variants within 3' UTRs and microRNAs binding as modulators of cancer risk and clinical outcome.

Naccarati A, Rosa F, Vymetalkova V, Barone E, Jiraskova K, Di Gaetano C, Novotny J, Levy M, Vodickova L, Gemignani F, Buchler T, Landi S, Vodicka P, Pardini B.

Oncotarget. 2016 Apr 26;7(17):23156-69. doi: 10.18632/oncotarget.6804.

18.

Bioinformatic tools for microRNA dissection.

Akhtar MM, Micolucci L, Islam MS, Olivieri F, Procopio AD.

Nucleic Acids Res. 2016 Jan 8;44(1):24-44. doi: 10.1093/nar/gkv1221. Epub 2015 Nov 17. Review.

19.

Prediction of Causal Candidate Genes in Coronary Artery Disease Loci.

Brænne I, Civelek M, Vilne B, Di Narzo A, Johnson AD, Zhao Y, Reiz B, Codoni V, Webb TR, Foroughi Asl H, Hamby SE, Zeng L, Trégouët DA, Hao K, Topol EJ, Schadt EE, Yang X, Samani NJ, Björkegren JL, Erdmann J, Schunkert H, Lusis AJ; Leducq Consortium CAD Genomics‡.

Arterioscler Thromb Vasc Biol. 2015 Oct;35(10):2207-17. doi: 10.1161/ATVBAHA.115.306108. Epub 2015 Aug 20.

20.

Identification of a novel FGFRL1 MicroRNA target site polymorphism for bone mineral density in meta-analyses of genome-wide association studies.

Niu T, Liu N, Zhao M, Xie G, Zhang L, Li J, Pei YF, Shen H, Fu X, He H, Lu S, Chen XD, Tan LJ, Yang TL, Guo Y, Leo PJ, Duncan EL, Shen J, Guo YF, Nicholson GC, Prince RL, Eisman JA, Jones G, Sambrook PN, Hu X, Das PM, Tian Q, Zhu XZ, Papasian CJ, Brown MA, Uitterlinden AG, Wang YP, Xiang S, Deng HW.

Hum Mol Genet. 2015 Aug 15;24(16):4710-27. doi: 10.1093/hmg/ddv144. Epub 2015 May 4.

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