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Items: 1 to 20 of 45

1.

hsa-miR-301a- and SOX10-dependent miRNA-TF-mRNA regulatory circuits in breast cancer.

Öztemur Islakoğlu Y, Noyan S, Gür Dedeoğlu B.

Turk J Biol. 2018 Apr 27;42(2):103-112. doi: 10.3906/biy-1708-17. eCollection 2018.

3.

iDEP: an integrated web application for differential expression and pathway analysis of RNA-Seq data.

Ge SX, Son EW, Yao R.

BMC Bioinformatics. 2018 Dec 19;19(1):534. doi: 10.1186/s12859-018-2486-6.

4.

TransmiR v2.0: an updated transcription factor-microRNA regulation database.

Tong Z, Cui Q, Wang J, Zhou Y.

Nucleic Acids Res. 2019 Jan 8;47(D1):D253-D258. doi: 10.1093/nar/gky1023.

6.

rSjP40 suppresses hepatic stellate cell activation by promoting microRNA-155 expression and inhibiting STAT5 and FOXO3a expression.

Zhu D, Yang C, Shen P, Chen L, Chen J, Sun X, Duan L, Zhang L, Zhu J, Duan Y.

J Cell Mol Med. 2018 Nov;22(11):5486-5493. doi: 10.1111/jcmm.13819. Epub 2018 Aug 9.

7.

Expression of microRNA-99a-3p in Prostate Cancer Based on Bioinformatics Data and Meta-Analysis of a Literature Review of 965 Cases.

Yan HB, Zhang Y, Cen JM, Wang X, Gan BL, Huang JC, Li JY, Song QH, Li SH, Chen G.

Med Sci Monit. 2018 Jul 12;24:4807-4822. doi: 10.12659/MSM.908057.

8.

Integration analysis of microRNA and mRNA paired expression profiling identifies deregulated microRNA-transcription factor-gene regulatory networks in ovarian endometriosis.

Zhao L, Gu C, Ye M, Zhang Z, Li L, Fan W, Meng Y.

Reprod Biol Endocrinol. 2018 Jan 22;16(1):4. doi: 10.1186/s12958-017-0319-5.

9.

mirTrans: a resource of transcriptional regulation on microRNAs for human cell lines.

Hua X, Tang R, Xu X, Wang Z, Xu Q, Chen L, Wingender E, Li J, Zhang C, Wang J.

Nucleic Acids Res. 2018 Jan 4;46(D1):D168-D174. doi: 10.1093/nar/gkx996.

10.

Identification of molecular targets for esophageal carcinoma diagnosis using miRNA-seq and RNA-seq data from The Cancer Genome Atlas: a study of 187 cases.

Zeng JH, Xiong DD, Pang YY, Zhang Y, Tang RX, Luo DZ, Chen G.

Oncotarget. 2017 May 30;8(22):35681-35699. doi: 10.18632/oncotarget.16051.

11.

Human and Epstein-Barr Virus miRNA Profiling as Predictive Biomarkers for Endemic Burkitt Lymphoma.

Oduor CI, Movassagh M, Kaymaz Y, Chelimo K, Otieno J, Ong'echa JM, Moormann AM, Bailey JA.

Front Microbiol. 2017 Mar 28;8:501. doi: 10.3389/fmicb.2017.00501. eCollection 2017.

12.

ChIPBase v2.0: decoding transcriptional regulatory networks of non-coding RNAs and protein-coding genes from ChIP-seq data.

Zhou KR, Liu S, Sun WJ, Zheng LL, Zhou H, Yang JH, Qu LH.

Nucleic Acids Res. 2017 Jan 4;45(D1):D43-D50. doi: 10.1093/nar/gkw965. Epub 2016 Oct 23.

13.

Upregulation of CD4+T-Cell Derived MiR-223 in The Relapsing Phase of Multiple Sclerosis Patients.

Hosseini A, Ghaedi K, Tanhaei S, Ganjalikhani-Hakemi M, Teimuri S, Etemadifar M, Nasr Esfahani MH.

Cell J. 2016 Fall;18(3):371-80. Epub 2016 Aug 24.

14.

Integrated microRNA, gene expression and transcription factors signature in papillary thyroid cancer with lymph node metastasis.

Ab Mutalib NS, Othman SN, Mohamad Yusof A, Abdullah Suhaimi SN, Muhammad R, Jamal R.

PeerJ. 2016 Jun 15;4:e2119. doi: 10.7717/peerj.2119. eCollection 2016.

15.

Infinity: An In-Silico Tool for Genome-Wide Prediction of Specific DNA Matrices in miRNA Genomic Loci.

Falcone E, Grandoni L, Garibaldi F, Manni I, Filligoi G, Piaggio G, Gurtner A.

PLoS One. 2016 Apr 15;11(4):e0153658. doi: 10.1371/journal.pone.0153658. eCollection 2016.

16.

Small Genetic Circuits and MicroRNAs: Big Players in Polymerase II Transcriptional Control in Plants.

Megraw M, Cumbie JS, Ivanchenko MG, Filichkin SA.

Plant Cell. 2016 Feb;28(2):286-303. doi: 10.1105/tpc.15.00852. Epub 2016 Feb 11. Review.

17.

Elucidating MicroRNA Regulatory Networks Using Transcriptional, Post-transcriptional, and Histone Modification Measurements.

Gosline SJ, Gurtan AM, JnBaptiste CK, Bosson A, Milani P, Dalin S, Matthews BJ, Yap YS, Sharp PA, Fraenkel E.

Cell Rep. 2016 Jan 12;14(2):310-9. doi: 10.1016/j.celrep.2015.12.031. Epub 2015 Dec 31.

18.

MicroRNA expression is altered in lateral septum across reproductive stages.

Saul MC, Zhao C, Driessen TM, Eisinger BE, Gammie SC.

Neuroscience. 2016 Jan 15;312:130-40. doi: 10.1016/j.neuroscience.2015.11.019. Epub 2015 Nov 17.

19.

DIANA-miRGen v3.0: accurate characterization of microRNA promoters and their regulators.

Georgakilas G, Vlachos IS, Zagganas K, Vergoulis T, Paraskevopoulou MD, Kanellos I, Tsanakas P, Dellis D, Fevgas A, Dalamagas T, Hatzigeorgiou AG.

Nucleic Acids Res. 2016 Jan 4;44(D1):D190-5. doi: 10.1093/nar/gkv1254. Epub 2015 Nov 19.

20.

Bioinformatic tools for microRNA dissection.

Akhtar MM, Micolucci L, Islam MS, Olivieri F, Procopio AD.

Nucleic Acids Res. 2016 Jan 8;44(1):24-44. doi: 10.1093/nar/gkv1221. Epub 2015 Nov 17. Review.

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