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sRNA-Mediated Control of Transcription Termination in E. coli.

Sedlyarova N, Shamovsky I, Bharati BK, Epshtein V, Chen J, Gottesman S, Schroeder R, Nudler E.

Cell. 2016 Sep 22;167(1):111-121.e13. doi: 10.1016/j.cell.2016.09.004.


The i6A37 tRNA modification is essential for proper decoding of UUX-Leucine codons during rpoS and iraP translation.

Aubee JI, Olu M, Thompson KM.

RNA. 2016 May;22(5):729-42. doi: 10.1261/rna.053165.115. Epub 2016 Mar 15.


Small RNA Regulation of TolC, the Outer Membrane Component of Bacterial Multidrug Transporters.

Parker A, Gottesman S.

J Bacteriol. 2016 Jan 25;198(7):1101-13. doi: 10.1128/JB.00971-15.


Discovery and profiling of small RNAs responsive to stress conditions in the plant pathogen Pectobacterium atrosepticum.

Kwenda S, Gorshkov V, Ramesh AM, Naidoo S, Rubagotti E, Birch PR, Moleleki LN.

BMC Genomics. 2016 Jan 12;17:47. doi: 10.1186/s12864-016-2376-0.


Differential expression of small RNAs under chemical stress and fed-batch fermentation in E. coli.

Rau MH, Bojanovič K, Nielsen AT, Long KS.

BMC Genomics. 2015 Dec 10;16:1051. doi: 10.1186/s12864-015-2231-8.


Identification of novel sRNAs involved in biofilm formation, motility, and fimbriae formation in Escherichia coli.

Bak G, Lee J, Suk S, Kim D, Young Lee J, Kim KS, Choi BS, Lee Y.

Sci Rep. 2015 Oct 15;5:15287. doi: 10.1038/srep15287.


Constitutive expression of the sRNA GadY decreases acetate production and improves E. coli growth.

Negrete A, Shiloach J.

Microb Cell Fact. 2015 Sep 18;14:148. doi: 10.1186/s12934-015-0334-1.


Acidic Residues in the Hfq Chaperone Increase the Selectivity of sRNA Binding and Annealing.

Panja S, Santiago-Frangos A, Schu DJ, Gottesman S, Woodson SA.

J Mol Biol. 2015 Nov 6;427(22):3491-500. doi: 10.1016/j.jmb.2015.07.010. Epub 2015 Jul 18.


Experimental approaches to identify small RNAs and their diverse roles in bacteria--what we have learnt in one decade of MicA research.

Van Puyvelde S, Vanderleyden J, De Keersmaecker SC.

Microbiologyopen. 2015 Oct;4(5):699-711. doi: 10.1002/mbo3.263. Epub 2015 May 13. Review.


Target activation by regulatory RNAs in bacteria.

Papenfort K, Vanderpool CK.

FEMS Microbiol Rev. 2015 May;39(3):362-78. doi: 10.1093/femsre/fuv016. Epub 2015 Apr 30. Review.


Stress sigma factor RpoS degradation and translation are sensitive to the state of central metabolism.

Battesti A, Majdalani N, Gottesman S.

Proc Natl Acad Sci U S A. 2015 Apr 21;112(16):5159-64. doi: 10.1073/pnas.1504639112. Epub 2015 Apr 6.


Genome-wide identification of small RNAs in Bifidobacterium animalis subsp. lactis KLDS 2.0603 and their regulation role in the adaption to gastrointestinal environment.

Zhu DQ, Liu F, Sun Y, Yang LM, Xin L, Meng XC.

PLoS One. 2015 Feb 23;10(2):e0117373. doi: 10.1371/journal.pone.0117373. eCollection 2015.


Hfq binds directly to the ribosome-binding site of IS10 transposase mRNA to inhibit translation.

Ellis MJ, Trussler RS, Haniford DB.

Mol Microbiol. 2015 May;96(3):633-50. doi: 10.1111/mmi.12961. Epub 2015 Mar 11.


A nitric oxide regulated small RNA controls expression of genes involved in redox homeostasis in Bacillus subtilis.

Durand S, Braun F, Lioliou E, Romilly C, Helfer AC, Kuhn L, Quittot N, Nicolas P, Romby P, Condon C.

PLoS Genet. 2015 Feb 2;11(2):e1004957. doi: 10.1371/journal.pgen.1004957. eCollection 2015 Feb.


Protein mistranslation protects bacteria against oxidative stress.

Fan Y, Wu J, Ung MH, De Lay N, Cheng C, Ling J.

Nucleic Acids Res. 2015 Feb 18;43(3):1740-8. doi: 10.1093/nar/gku1404. Epub 2015 Jan 10.


Tn5 transposition in Escherichia coli is repressed by Hfq and activated by over-expression of the small non-coding RNA SgrS.

Ross JA, Trussler RS, Black MD, McLellan CR, Haniford DB.

Mob DNA. 2014 Nov 30;5(1):27. doi: 10.1186/s13100-014-0027-z. eCollection 2014.


The Cpx envelope stress response regulates and is regulated by small noncoding RNAs.

Vogt SL, Evans AD, Guest RL, Raivio TL.

J Bacteriol. 2014 Dec;196(24):4229-38. doi: 10.1128/JB.02138-14. Epub 2014 Sep 22.


Bacterial sigma factors as targets for engineered or synthetic transcriptional control.

Tripathi L, Zhang Y, Lin Z.

Front Bioeng Biotechnol. 2014 Sep 3;2:33. doi: 10.3389/fbioe.2014.00033. eCollection 2014. Review.


Expression of antisense small RNAs in response to stress in Pseudomonas aeruginosa.

Gómez-Lozano M, Marvig RL, Tulstrup MV, Molin S.

BMC Genomics. 2014 Sep 11;15:783. doi: 10.1186/1471-2164-15-783.


Regulatory RNAs involved in bacterial antibiotic resistance.

Lalaouna D, Eyraud A, Chabelskaya S, Felden B, Massé E.

PLoS Pathog. 2014 Aug 28;10(8):e1004299. doi: 10.1371/journal.ppat.1004299. eCollection 2014 Aug. Review. No abstract available.

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