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Items: 1 to 20 of 46

1.

Adaptive tuning of mutation rates allows fast response to lethal stress in Escherichia coli.

Swings T, Van den Bergh B, Wuyts S, Oeyen E, Voordeckers K, Verstrepen KJ, Fauvart M, Verstraeten N, Michiels J.

Elife. 2017 May 2;6. pii: e22939. doi: 10.7554/eLife.22939.

2.

Improved n-butanol production via co-expression of membrane-targeted tilapia metallothionein and the clostridial metabolic pathway in Escherichia coli.

Chin WC, Lin KH, Liu CC, Tsuge K, Huang CC.

BMC Biotechnol. 2017 Apr 11;17(1):36. doi: 10.1186/s12896-017-0356-3.

3.

Systems-level understanding of ethanol-induced stresses and adaptation in E. coli.

Cao H, Wei D, Yang Y, Shang Y, Li G, Zhou Y, Ma Q, Xu Y.

Sci Rep. 2017 Mar 16;7:44150. doi: 10.1038/srep44150.

4.

Enhancing poly(3-hydroxyalkanoate) production in Escherichia coli by the removal of the regulatory gene arcA.

Scheel RA, Ji L, Lundgren BR, Nomura CT.

AMB Express. 2016 Dec;6(1):120. doi: 10.1186/s13568-016-0291-z. Epub 2016 Nov 23.

5.

Benzoate- and Salicylate-Tolerant Strains of Escherichia coli K-12 Lose Antibiotic Resistance during Laboratory Evolution.

Creamer KE, Ditmars FS, Basting PJ, Kunka KS, Hamdallah IN, Bush SP, Scott Z, He A, Penix SR, Gonzales AS, Eder EK, Camperchioli DW, Berndt A, Clark MW, Rouhier KA, Slonczewski JL.

Appl Environ Microbiol. 2016 Dec 30;83(2). pii: e02736-16. doi: 10.1128/AEM.02736-16. Print 2017 Jan 15.

6.

Engineering membrane and cell-wall programs for tolerance to toxic chemicals: Beyond solo genes.

Sandoval NR, Papoutsakis ET.

Curr Opin Microbiol. 2016 Oct;33:56-66. doi: 10.1016/j.mib.2016.06.005. Epub 2016 Jul 1. Review.

PMID:
27376665
7.

Cellular Growth Arrest and Persistence from Enzyme Saturation.

Ray JC, Wickersheim ML, Jalihal AP, Adeshina YO, Cooper TF, Balázsi G.

PLoS Comput Biol. 2016 Mar 24;12(3):e1004825. doi: 10.1371/journal.pcbi.1004825. eCollection 2016 Mar.

8.

Multifactorial Competition and Resistance in a Two-Species Bacterial System.

Khare A, Tavazoie S.

PLoS Genet. 2015 Dec 8;11(12):e1005715. doi: 10.1371/journal.pgen.1005715. eCollection 2015 Dec.

9.

Adaptation to High Ethanol Reveals Complex Evolutionary Pathways.

Voordeckers K, Kominek J, Das A, Espinosa-Cantú A, De Maeyer D, Arslan A, Van Pee M, van der Zande E, Meert W, Yang Y, Zhu B, Marchal K, DeLuna A, Van Noort V, Jelier R, Verstrepen KJ.

PLoS Genet. 2015 Nov 6;11(11):e1005635. doi: 10.1371/journal.pgen.1005635. eCollection 2015 Nov.

10.

A metabolomics-based strategy for identification of gene targets for phenotype improvement and its application to 1-butanol tolerance in Saccharomyces cerevisiae.

Teoh ST, Putri S, Mukai Y, Bamba T, Fukusaki E.

Biotechnol Biofuels. 2015 Sep 15;8:144. doi: 10.1186/s13068-015-0330-z. eCollection 2015.

11.

Adaptive Evolution of Thermotoga maritima Reveals Plasticity of the ABC Transporter Network.

Latif H, Sahin M, Tarasova J, Tarasova Y, Portnoy VA, Nogales J, Zengler K.

Appl Environ Microbiol. 2015 Aug 15;81(16):5477-85. doi: 10.1128/AEM.01365-15. Epub 2015 Jun 5.

12.

Expression of heterologous sigma factors enables functional screening of metagenomic and heterologous genomic libraries.

Gaida SM, Sandoval NR, Nicolaou SA, Chen Y, Venkataramanan KP, Papoutsakis ET.

Nat Commun. 2015 May 6;6:7045. doi: 10.1038/ncomms8045.

13.

Survival probability of beneficial mutations in bacterial batch culture.

Wahl LM, Zhu AD.

Genetics. 2015 May;200(1):309-20. doi: 10.1534/genetics.114.172890. Epub 2015 Mar 9.

14.

Thermal and solvent stress cross-tolerance conferred to Corynebacterium glutamicum by adaptive laboratory evolution.

Oide S, Gunji W, Moteki Y, Yamamoto S, Suda M, Jojima T, Yukawa H, Inui M.

Appl Environ Microbiol. 2015 Apr;81(7):2284-98. doi: 10.1128/AEM.03973-14. Epub 2015 Jan 16.

15.

Acid-adapted strains of Escherichia coli K-12 obtained by experimental evolution.

Harden MM, He A, Creamer K, Clark MW, Hamdallah I, Martinez KA 2nd, Kresslein RL, Bush SP, Slonczewski JL.

Appl Environ Microbiol. 2015 Mar;81(6):1932-41. doi: 10.1128/AEM.03494-14. Epub 2015 Jan 2.

16.

Metabolomic basis of laboratory evolution of butanol tolerance in photosynthetic Synechocystis sp. PCC 6803.

Wang Y, Shi M, Niu X, Zhang X, Gao L, Chen L, Wang J, Zhang W.

Microb Cell Fact. 2014 Nov 1;13:151. doi: 10.1186/s12934-014-0151-y.

17.

Comparative genomics of Saccharomyces cerevisiae natural isolates for bioenergy production.

Wohlbach DJ, Rovinskiy N, Lewis JA, Sardi M, Schackwitz WS, Martin JA, Deshpande S, Daum CG, Lipzen A, Sato TK, Gasch AP.

Genome Biol Evol. 2014 Sep;6(9):2557-66.

18.

Aromatic inhibitors derived from ammonia-pretreated lignocellulose hinder bacterial ethanologenesis by activating regulatory circuits controlling inhibitor efflux and detoxification.

Keating DH, Zhang Y, Ong IM, McIlwain S, Morales EH, Grass JA, Tremaine M, Bothfeld W, Higbee A, Ulbrich A, Balloon AJ, Westphall MS, Aldrich J, Lipton MS, Kim J, Moskvin OV, Bukhman YV, Coon JJ, Kiley PJ, Bates DM, Landick R.

Front Microbiol. 2014 Aug 13;5:402. doi: 10.3389/fmicb.2014.00402. eCollection 2014.

19.

Quantitative analysis of intracellular communication and signaling errors in signaling networks.

Habibi I, Emamian ES, Abdi A.

BMC Syst Biol. 2014 Aug 13;8:89. doi: 10.1186/s12918-014-0089-z.

20.

Evolution of Escherichia coli to 42 °C and subsequent genetic engineering reveals adaptive mechanisms and novel mutations.

Sandberg TE, Pedersen M, LaCroix RA, Ebrahim A, Bonde M, Herrgard MJ, Palsson BO, Sommer M, Feist AM.

Mol Biol Evol. 2014 Oct;31(10):2647-62. doi: 10.1093/molbev/msu209. Epub 2014 Jul 10.

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