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Items: 9


Methyl-CpG-binding domain sequencing reveals a prognostic methylation signature in neuroblastoma.

Decock A, Ongenaert M, Cannoodt R, Verniers K, De Wilde B, Laureys G, Van Roy N, Berbegall AP, Bienertova-Vasku J, Bown N, Clément N, Combaret V, Haber M, Hoyoux C, Murray J, Noguera R, Pierron G, Schleiermacher G, Schulte JH, Stallings RL, Tweddle DA; Children’s Cancer and Leukaemia Group (CCLG)., De Preter K, Speleman F, Vandesompele J.

Oncotarget. 2016 Jan 12;7(2):1960-72. doi: 10.18632/oncotarget.6477.


Base resolution methylome profiling: considerations in platform selection, data preprocessing and analysis.

Sun Z, Cunningham J, Slager S, Kocher JP.

Epigenomics. 2015 Aug;7(5):813-28. doi: 10.2217/epi.15.21. Review.


Is this the right normalization? A diagnostic tool for ChIP-seq normalization.

Angelini C, Heller R, Volkinshtein R, Yekutieli D.

BMC Bioinformatics. 2015 May 9;16:150. doi: 10.1186/s12859-015-0579-z.


Whole genome sequencing of the black grouse (Tetrao tetrix): reference guided assembly suggests faster-Z and MHC evolution.

Wang B, Ekblom R, Bunikis I, Siitari H, Höglund J.

BMC Genomics. 2014 Mar 6;15:180. doi: 10.1186/1471-2164-15-180.


Integrated profiling of microRNA expression in membranous nephropathy using high-throughput sequencing technology.

Chen W, Lin X, Huang J, Tan K, Chen Y, Peng W, Li W, Dai Y.

Int J Mol Med. 2014 Jan;33(1):25-34. doi: 10.3892/ijmm.2013.1554.


Genome-wide promoter methylation analysis in neuroblastoma identifies prognostic methylation biomarkers.

Decock A, Ongenaert M, Hoebeeck J, De Preter K, Van Peer G, Van Criekinge W, Ladenstein R, Schulte JH, Noguera R, Stallings RL, Van Damme A, Laureys G, Vermeulen J, Van Maerken T, Speleman F, Vandesompele J.

Genome Biol. 2012 Oct 3;13(10):R95. doi: 10.1186/gb-2012-13-10-r95.


Genomic impact of cigarette smoke, with application to three smoking-related diseases.

Talikka M, Sierro N, Ivanov NV, Chaudhary N, Peck MJ, Hoeng J, Coggins CR, Peitsch MC.

Crit Rev Toxicol. 2012 Nov;42(10):877-89. doi: 10.3109/10408444.2012.725244. Review.


Human genetics and genomics a decade after the release of the draft sequence of the human genome.

Naidoo N, Pawitan Y, Soong R, Cooper DN, Ku CS.

Hum Genomics. 2011 Oct;5(6):577-622. Review.


MethylCoder: software pipeline for bisulfite-treated sequences.

Pedersen B, Hsieh TF, Ibarra C, Fischer RL.

Bioinformatics. 2011 Sep 1;27(17):2435-6. doi: 10.1093/bioinformatics/btr394.

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