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Enterococci and Their Interactions with the Intestinal Microbiome.

Dubin K, Pamer EG.

Microbiol Spectr. 2014 Nov;5(6). doi: 10.1128/microbiolspec.BAD-0014-2016.


Pathogenicity Locus, Core Genome, and Accessory Gene Contributions to Clostridium difficile Virulence.

Lewis BB, Carter RA, Ling L, Leiner I, Taur Y, Kamboj M, Dubberke ER, Xavier J, Pamer EG.

MBio. 2017 Aug 8;8(4). pii: e00885-17. doi: 10.1128/mBio.00885-17.


Microbial approaches for targeting antibiotic-resistant bacteria.

Wong WF, Santiago M.

Microb Biotechnol. 2017 Sep;10(5):1047-1053. doi: 10.1111/1751-7915.12783. Epub 2017 Aug 3. Review.


MyD88 signaling in dendritic cells and the intestinal epithelium controls immunity against intestinal infection with C. rodentium.

Friedrich C, Mamareli P, Thiemann S, Kruse F, Wang Z, Holzmann B, Strowig T, Sparwasser T, Lochner M.

PLoS Pathog. 2017 May 16;13(5):e1006357. doi: 10.1371/journal.ppat.1006357. eCollection 2017 May.


Cooperating Commensals Restore Colonization Resistance to Vancomycin-Resistant Enterococcus faecium.

Caballero S, Kim S, Carter RA, Leiner IM, Sušac B, Miller L, Kim GJ, Ling L, Pamer EG.

Cell Host Microbe. 2017 May 10;21(5):592-602.e4. doi: 10.1016/j.chom.2017.04.002.


Roles of the intestinal microbiota in pathogen protection.

Ubeda C, Djukovic A, Isaac S.

Clin Transl Immunology. 2017 Feb 10;6(2):e128. doi: 10.1038/cti.2017.2. eCollection 2017 Feb. Review.


Intestinal dysbiosis and allogeneic hematopoietic progenitor cell transplantation.

Raghunathan VM, Sheng I, Lim SH.

J Transl Med. 2016 Dec 3;14(1):335. Review.


Flagellin-Mediated Protection against Intestinal Yersinia pseudotuberculosis Infection Does Not Require Interleukin-22.

Porte R, Van Maele L, Muñoz-Wolf N, Foligné B, Dumoutier L, Tabareau J, Cayet D, Gosset P, Jonckheere N, Van Seuningen I, Chabalgoity JA, Simonet M, Lamkanfi M, Renauld JC, Sirard JC, Carnoy C.

Infect Immun. 2017 Jan 26;85(2). pii: e00806-16. doi: 10.1128/IAI.00806-16. Print 2017 Feb.


Antibody-Based Therapy for Enterococcal Catheter-Associated Urinary Tract Infections.

Flores-Mireles AL, Walker JN, Potretzke A, Schreiber HL 4th, Pinkner JS, Bauman TM, Park AM, Desai A, Hultgren SJ, Caparon MG.

MBio. 2016 Oct 25;7(5). pii: e01653-16. doi: 10.1128/mBio.01653-16.


Pulmonary Th17 Antifungal Immunity Is Regulated by the Gut Microbiome.

McAleer JP, Nguyen NL, Chen K, Kumar P, Ricks DM, Binnie M, Armentrout RA, Pociask DA, Hein A, Yu A, Vikram A, Bibby K, Umesaki Y, Rivera A, Sheppard D, Ouyang W, Hooper LV, Kolls JK.

J Immunol. 2016 Jul 1;197(1):97-107. doi: 10.4049/jimmunol.1502566. Epub 2016 May 23.


Antibiotic-Induced Changes in the Intestinal Microbiota and Disease.

Becattini S, Taur Y, Pamer EG.

Trends Mol Med. 2016 Jun;22(6):458-78. doi: 10.1016/j.molmed.2016.04.003. Epub 2016 May 10. Review.


TLR-7 activation enhances IL-22-mediated colonization resistance against vancomycin-resistant enterococcus.

Abt MC, Buffie CG, Sušac B, Becattini S, Carter RA, Leiner I, Keith JW, Artis D, Osborne LC, Pamer EG.

Sci Transl Med. 2016 Feb 24;8(327):327ra25. doi: 10.1126/scitranslmed.aad6663.


Lambda Interferon Restructures the Nasal Microbiome and Increases Susceptibility to Staphylococcus aureus Superinfection.

Planet PJ, Parker D, Cohen TS, Smith H, Leon JD, Ryan C, Hammer TJ, Fierer N, Chen EI, Prince AS.

MBio. 2016 Feb 9;7(1):e01939-15. doi: 10.1128/mBio.01939-15.


Biofilm-associated bacterial amyloids dampen inflammation in the gut: oral treatment with curli fibres reduces the severity of hapten-induced colitis in mice.

Oppong GO, Rapsinski GJ, Tursi SA, Biesecker SG, Klein-Szanto AJ, Goulian M, McCauley C, Healy C, Wilson RP, Tükel C.

NPJ Biofilms Microbiomes. 2015;1. pii: 15019. Epub 2015 Oct 14.


Expression and Significance of the HIP/PAP and RegIIIγ Antimicrobial Peptides during Mammalian Urinary Tract Infection.

Spencer JD, Jackson AR, Li B, Ching CB, Vonau M, Easterling RS, Schwaderer AL, McHugh KM, Becknell B.

PLoS One. 2015 Dec 10;10(12):e0144024. doi: 10.1371/journal.pone.0144024. eCollection 2015.


Complete Genome Sequence of the Human Gut Symbiont Roseburia hominis.

Travis AJ, Kelly D, Flint HJ, Aminov RI.

Genome Announc. 2015 Nov 5;3(6). pii: e01286-15. doi: 10.1128/genomeA.01286-15.


Cross-talk between type 3 innate lymphoid cells and the gut microbiota in inflammatory bowel disease.

Buela KA, Omenetti S, Pizarro TT.

Curr Opin Gastroenterol. 2015 Nov;31(6):449-55. doi: 10.1097/MOG.0000000000000217. Review.


Distinct but Spatially Overlapping Intestinal Niches for Vancomycin-Resistant Enterococcus faecium and Carbapenem-Resistant Klebsiella pneumoniae.

Caballero S, Carter R, Ke X, Sušac B, Leiner IM, Kim GJ, Miller L, Ling L, Manova K, Pamer EG.

PLoS Pathog. 2015 Sep 3;11(9):e1005132. doi: 10.1371/journal.ppat.1005132. eCollection 2015 Sep.


A Toll-Like Receptor 5 Agonist Improves the Efficacy of Antibiotics in Treatment of Primary and Influenza Virus-Associated Pneumococcal Mouse Infections.

Porte R, Fougeron D, Muñoz-Wolf N, Tabareau J, Georgel AF, Wallet F, Paget C, Trottein F, Chabalgoity JA, Carnoy C, Sirard JC.

Antimicrob Agents Chemother. 2015 Oct;59(10):6064-72. doi: 10.1128/AAC.01210-15. Epub 2015 Jul 20.


Inference of Network Dynamics and Metabolic Interactions in the Gut Microbiome.

Steinway SN, Biggs MB, Loughran TP Jr, Papin JA, Albert R.

PLoS Comput Biol. 2015 Jun 23;11(5):e1004338. doi: 10.1371/journal.pcbi.1004338. eCollection 2015 May.

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