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Items: 15

1.

Single-cell mRNA quantification and differential analysis with Census.

Qiu X, Hill A, Packer J, Lin D, Ma YA, Trapnell C.

Nat Methods. 2017 Mar;14(3):309-315. doi: 10.1038/nmeth.4150. Epub 2017 Jan 23.

2.

Oxygen differentially affects the hox proteins Hoxb5 and Hoxa5 altering airway branching and lung vascular formation.

Silfa-Mazara F, Mujahid S, Thomas C, Vong T, Larsson I, Nielsen HC, Volpe MV.

J Cell Commun Signal. 2014 Sep;8(3):231-44. doi: 10.1007/s12079-014-0237-7. Epub 2014 Jul 30.

3.

CCAAT/enhancer-binding protein-α suppresses lung tumor development in mice through the p38α MAP kinase pathway.

Sato A, Yamada N, Ogawa Y, Ikegami M.

PLoS One. 2013;8(2):e57013. doi: 10.1371/journal.pone.0057013. Epub 2013 Feb 20.

4.

A Relationship between Epithelial Maturation, Bronchopulmonary Dysplasia, and Chronic Obstructive Pulmonary Disease.

Roos AB, Berg T, Nord M.

Pulm Med. 2012;2012:196194. doi: 10.1155/2012/196194. Epub 2012 Dec 24.

5.

Kruppel-like factor 5 controls villus formation and initiation of cytodifferentiation in the embryonic intestinal epithelium.

Bell SM, Zhang L, Xu Y, Besnard V, Wert SE, Shroyer N, Whitsett JA.

Dev Biol. 2013 Mar 15;375(2):128-39. doi: 10.1016/j.ydbio.2012.12.010. Epub 2012 Dec 22.

6.

FOXM1 promotes allergen-induced goblet cell metaplasia and pulmonary inflammation.

Ren X, Shah TA, Ustiyan V, Zhang Y, Shinn J, Chen G, Whitsett JA, Kalin TV, Kalinichenko VV.

Mol Cell Biol. 2013 Jan;33(2):371-86. doi: 10.1128/MCB.00934-12. Epub 2012 Nov 12.

7.

Gene regulatory network analysis supports inflammation as a key neurodegeneration process in prion disease.

Crespo I, Roomp K, Jurkowski W, Kitano H, del Sol A.

BMC Syst Biol. 2012 Oct 15;6:132. doi: 10.1186/1752-0509-6-132.

8.

Foxm1 transcription factor is critical for proliferation and differentiation of Clara cells during development of conducting airways.

Ustiyan V, Wert SE, Ikegami M, Wang IC, Kalin TV, Whitsett JA, Kalinichenko VV.

Dev Biol. 2012 Oct 15;370(2):198-212. doi: 10.1016/j.ydbio.2012.07.028. Epub 2012 Aug 2.

9.

CCAAT/enhancer binding protein-α regulates the protease/antiprotease balance required for bronchiolar epithelium regeneration.

Sato A, Xu Y, Whitsett JA, Ikegami M.

Am J Respir Cell Mol Biol. 2012 Oct;47(4):454-63. doi: 10.1165/rcmb.2011-0239OC. Epub 2012 May 31.

10.

Kruppel-like factor 5 is required for formation and differentiation of the bladder urothelium.

Bell SM, Zhang L, Mendell A, Xu Y, Haitchi HM, Lessard JL, Whitsett JA.

Dev Biol. 2011 Oct 1;358(1):79-90. doi: 10.1016/j.ydbio.2011.07.020. Epub 2011 Jul 22.

11.

Conditional deletion of Nrf2 in airway epithelium exacerbates acute lung injury and impairs the resolution of inflammation.

Reddy NM, Potteti HR, Mariani TJ, Biswal S, Reddy SP.

Am J Respir Cell Mol Biol. 2011 Dec;45(6):1161-8. doi: 10.1165/rcmb.2011-0144OC. Epub 2011 Jun 9.

12.

Silencing hyperoxia-induced C/EBPα in neonatal mice improves lung architecture via enhanced proliferation of alveolar epithelial cells.

Yang G, Hinson MD, Bordner JE, Lin QS, Fernando AP, La P, Wright CJ, Dennery PA.

Am J Physiol Lung Cell Mol Physiol. 2011 Aug;301(2):L187-96. doi: 10.1152/ajplung.00082.2011. Epub 2011 May 13.

13.

Comparative proteomic analysis of lung lamellar bodies and lysosome-related organelles.

Ridsdale R, Na CL, Xu Y, Greis KD, Weaver T.

PLoS One. 2011 Jan 26;6(1):e16482. doi: 10.1371/journal.pone.0016482.

14.

A systems approach to mapping transcriptional networks controlling surfactant homeostasis.

Xu Y, Zhang M, Wang Y, Kadambi P, Dave V, Lu LJ, Whitsett JA.

BMC Genomics. 2010 Jul 26;11:451. doi: 10.1186/1471-2164-11-451.

15.

Conditional deletion of Abca3 in alveolar type II cells alters surfactant homeostasis in newborn and adult mice.

Besnard V, Matsuzaki Y, Clark J, Xu Y, Wert SE, Ikegami M, Stahlman MT, Weaver TE, Hunt AN, Postle AD, Whitsett JA.

Am J Physiol Lung Cell Mol Physiol. 2010 May;298(5):L646-59. doi: 10.1152/ajplung.00409.2009. Epub 2010 Feb 26.

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