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Evidence of Recent Intricate Adaptation in Human Populations.

Park L.

PLoS One. 2016 Dec 19;11(12):e0165870. doi: 10.1371/journal.pone.0165870. eCollection 2016.


Understanding rare and common diseases in the context of human evolution.

Quintana-Murci L.

Genome Biol. 2016 Nov 7;17(1):225. Review.


Natural Selection in the Great Apes.

Cagan A, Theunert C, Laayouni H, Santpere G, Pybus M, Casals F, Prüfer K, Navarro A, Marques-Bonet T, Bertranpetit J, Andrés AM.

Mol Biol Evol. 2016 Dec;33(12):3268-3283. Epub 2016 Oct 30.


Genomic regions, cellular components and gene regulatory basis underlying pod length variations in cowpea (V. unguiculata L. Walp).

Xu P, Wu X, Muñoz-Amatriaín M, Wang B, Wu X, Hu Y, Huynh BL, Close TJ, Roberts PA, Zhou W, Lu Z, Li G.

Plant Biotechnol J. 2017 May;15(5):547-557. doi: 10.1111/pbi.12639. Epub 2016 Oct 17.


Borrowed alleles and convergence in serpentine adaptation.

Arnold BJ, Lahner B, DaCosta JM, Weisman CM, Hollister JD, Salt DE, Bomblies K, Yant L.

Proc Natl Acad Sci U S A. 2016 Jul 19;113(29):8320-5. doi: 10.1073/pnas.1600405113. Epub 2016 Jun 29.


A flexible method for estimating the fraction of fitness influencing mutations from large sequencing data sets.

Moon S, Akey JM.

Genome Res. 2016 Jun;26(6):834-43. doi: 10.1101/gr.203059.115. Epub 2016 Apr 14.


Variation in Linked Selection and Recombination Drive Genomic Divergence during Allopatric Speciation of European and American Aspens.

Wang J, Street NR, Scofield DG, Ingvarsson PK.

Mol Biol Evol. 2016 Jul;33(7):1754-67. doi: 10.1093/molbev/msw051. Epub 2016 Mar 15.


Genomic epidemiology of artemisinin resistant malaria.

MalariaGEN Plasmodium falciparum Community Project.

Elife. 2016 Mar 4;5. pii: e08714. doi: 10.7554/eLife.08714.


Whole-genome sequence analyses of Western Central African Pygmy hunter-gatherers reveal a complex demographic history and identify candidate genes under positive natural selection.

Hsieh P, Veeramah KR, Lachance J, Tishkoff SA, Wall JD, Hammer MF, Gutenkunst RN.

Genome Res. 2016 Mar;26(3):279-90. doi: 10.1101/gr.192971.115. Epub 2016 Feb 17.


Recent Selection Changes in Human Genes under Long-Term Balancing Selection.

de Filippo C, Key FM, Ghirotto S, Benazzo A, Meneu JR, Weihmann A; NISC Comparative Sequence Program, Parra G, Green ED, Andrés AM.

Mol Biol Evol. 2016 Jun;33(6):1435-47. doi: 10.1093/molbev/msw023. Epub 2016 Feb 1.


A probabilistic method for testing and estimating selection differences between populations.

He Y, Wang M, Huang X, Li R, Xu H, Xu S, Jin L.

Genome Res. 2015 Dec;25(12):1903-9. doi: 10.1101/gr.192336.115. Epub 2015 Oct 13.


Darwin and Fisher meet at biotech: on the potential of computational molecular evolution in industry.

Anisimova M.

BMC Evol Biol. 2015 May 1;15:76. doi: 10.1186/s12862-015-0352-y.


Differential Natural Selection of Human Zinc Transporter Genes between African and Non-African Populations.

Zhang C, Li J, Tian L, Lu D, Yuan K, Yuan Y, Xu S.

Sci Rep. 2015 Apr 30;5:9658. doi: 10.1038/srep09658.


Micro- and macro-geographic scale effect on the molecular imprint of selection and adaptation in Norway spruce.

Scalfi M, Mosca E, Di Pierro EA, Troggio M, Vendramin GG, Sperisen C, La Porta N, Neale DB.

PLoS One. 2014 Dec 31;9(12):e115499. doi: 10.1371/journal.pone.0115499. eCollection 2014.


Sampling strategies for frequency spectrum-based population genomic inference.

Robinson JD, Coffman AJ, Hickerson MJ, Gutenkunst RN.

BMC Evol Biol. 2014 Dec 4;14:254. doi: 10.1186/s12862-014-0254-4.


A model-based approach for identifying signatures of ancient balancing selection in genetic data.

DeGiorgio M, Lohmueller KE, Nielsen R.

PLoS Genet. 2014 Aug 21;10(8):e1004561. doi: 10.1371/journal.pgen.1004561. eCollection 2014 Aug.


The relevance of HLA sequencing in population genetics studies.

Sanchez-Mazas A, Meyer D.

J Immunol Res. 2014;2014:971818. doi: 10.1155/2014/971818. Epub 2014 Jul 15. Review.


High-throughput transcriptome sequencing and preliminary functional analysis in four Neotropical tree species.

Brousseau L, Tinaut A, Duret C, Lang T, Garnier-Gere P, Scotti I.

BMC Genomics. 2014 Mar 27;15:238. doi: 10.1186/1471-2164-15-238.


Theory and applications of a deterministic approximation to the coalescent model.

Jewett EM, Rosenberg NA.

Theor Popul Biol. 2014 May;93:14-29. doi: 10.1016/j.tpb.2013.12.007. Epub 2014 Jan 7.


Detecting and measuring selection from gene frequency data.

Vitalis R, Gautier M, Dawson KJ, Beaumont MA.

Genetics. 2014 Mar;196(3):799-817. doi: 10.1534/genetics.113.152991. Epub 2013 Dec 20.

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