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Biosensors and their applications - A review.

Mehrotra P.

J Oral Biol Craniofac Res. 2016 May-Aug;6(2):153-9. doi: 10.1016/j.jobcr.2015.12.002. Epub 2016 Jan 6. Review.


Combinatorial Cis-regulation in Saccharomyces Species.

Spivak AT, Stormo GD.

G3 (Bethesda). 2016 Jan 15;6(3):653-67. doi: 10.1534/g3.115.024331.


Divergent Evolution of the Transcriptional Network Controlled by Snf1-Interacting Protein Sip4 in Budding Yeasts.

Mehlgarten C, Krijger JJ, Lemnian I, Gohr A, Kasper L, Diesing AK, Grosse I, Breunig KD.

PLoS One. 2015 Oct 6;10(10):e0139464. doi: 10.1371/journal.pone.0139464. eCollection 2015.


Accurate identification of centromere locations in yeast genomes using Hi-C.

Varoquaux N, Liachko I, Ay F, Burton JN, Shendure J, Dunham MJ, Vert JP, Noble WS.

Nucleic Acids Res. 2015 Jun 23;43(11):5331-9. doi: 10.1093/nar/gkv424. Epub 2015 May 4.


Protospacer adjacent motif (PAM)-distal sequences engage CRISPR Cas9 DNA target cleavage.

Cencic R, Miura H, Malina A, Robert F, Ethier S, Schmeing TM, Dostie J, Pelletier J.

PLoS One. 2014 Oct 2;9(10):e109213. doi: 10.1371/journal.pone.0109213. eCollection 2014.


Global analysis of transcription factor-binding sites in yeast using ChIP-Seq.

Lefran├žois P, Gallagher JE, Snyder M.

Methods Mol Biol. 2014;1205:231-55. doi: 10.1007/978-1-4939-1363-3_15.


The centromere: chromatin foundation for the kinetochore machinery.

Fukagawa T, Earnshaw WC.

Dev Cell. 2014 Sep 8;30(5):496-508. doi: 10.1016/j.devcel.2014.08.016. Review.


Regulatory analysis of the C. elegans genome with spatiotemporal resolution.

Araya CL, Kawli T, Kundaje A, Jiang L, Wu B, Vafeados D, Terrell R, Weissdepp P, Gevirtzman L, Mace D, Niu W, Boyle AP, Xie D, Ma L, Murray JI, Reinke V, Waterston RH, Snyder M.

Nature. 2014 Aug 28;512(7515):400-5. doi: 10.1038/nature13497. Erratum in: Nature. 2015 Dec 3;528(7580):152.


The FACT complex interacts with the E3 ubiquitin ligase Psh1 to prevent ectopic localization of CENP-A.

Deyter GM, Biggins S.

Genes Dev. 2014 Aug 15;28(16):1815-26. doi: 10.1101/gad.243113.114.


Classifying leukemia types with chromatin conformation data.

Rousseau M, Ferraiuolo MA, Crutchley JL, Wang XQ, Miura H, Blanchette M, Dostie J.

Genome Biol. 2014 Apr 30;15(4):R60. doi: 10.1186/gb-2014-15-4-r60.


Characterizing a collective and dynamic component of chromatin immunoprecipitation enrichment profiles in yeast.

Ward LD, Wang J, Bussemaker HJ.

BMC Genomics. 2014 Jun 19;15:494. doi: 10.1186/1471-2164-15-494.


A method for generating highly multiplexed ChIP-seq libraries.

Ford E, Nikopoulou C, Kokkalis A, Thanos D.

BMC Res Notes. 2014 May 22;7:312. doi: 10.1186/1756-0500-7-312.


Holocentromeres are dispersed point centromeres localized at transcription factor hotspots.

Steiner FA, Henikoff S.

Elife. 2014 Jan 1;3:e02025. doi: 10.7554/eLife.02025.


The application of next generation sequencing in DNA methylation analysis.

Zhang Y, Jeltsch A.

Genes (Basel). 2010 Jun 4;1(1):85-101. doi: 10.3390/genes1010085.


Scm3 deposits a (Cse4-H4)2 tetramer onto DNA through a Cse4-H4 dimer intermediate.

Dechassa ML, Wyns K, Luger K.

Nucleic Acids Res. 2014 May;42(9):5532-42. doi: 10.1093/nar/gku205. Epub 2014 Mar 12.


Transcriptional regulation prediction of antiestrogen resistance in breast cancer based on RNA polymerase II binding data.

Zhang D, Wang G, Wang Y.

BMC Bioinformatics. 2014;15 Suppl 2:S10. doi: 10.1186/1471-2105-15-S2-S10. Epub 2014 Jan 24.


Divergence in a master variator generates distinct phenotypes and transcriptional responses.

Gallagher JE, Zheng W, Rong X, Miranda N, Lin Z, Dunn B, Zhao H, Snyder MP.

Genes Dev. 2014 Feb 15;28(4):409-21. doi: 10.1101/gad.228940.113.


Insulin/IGF1 signaling inhibits age-dependent axon regeneration.

Byrne AB, Walradt T, Gardner KE, Hubbert A, Reinke V, Hammarlund M.

Neuron. 2014 Feb 5;81(3):561-73. doi: 10.1016/j.neuron.2013.11.019. Epub 2014 Jan 16.


A microscopy-based screen employing multiplex genome sequencing identifies cargo-specific requirements for dynein velocity.

Tan K, Roberts AJ, Chonofsky M, Egan MJ, Reck-Peterson SL.

Mol Biol Cell. 2014 Mar;25(5):669-78. doi: 10.1091/mbc.E13-09-0557. Epub 2014 Jan 8.

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