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Items: 1 to 20 of 161

1.

Uncovering anthocyanin biosynthesis related microRNAs and their target genes by small RNA and degradome sequencing in tuberous roots of sweetpotato.

He L, Tang R, Shi X, Wang W, Cao Q, Liu X, Wang T, Sun Y, Zhang H, Li R, Jia X.

BMC Plant Biol. 2019 Jun 3;19(1):232. doi: 10.1186/s12870-019-1790-2.

2.

Updated annotation of the wild strawberry Fragaria vesca V4 genome.

Li Y, Pi M, Gao Q, Liu Z, Kang C.

Hortic Res. 2019 May 1;6:61. doi: 10.1038/s41438-019-0142-6. eCollection 2019.

3.

The miRNA-Mediated Post-Transcriptional Regulation of Maize in Response to High Temperature.

Zhang M, An P, Li H, Wang X, Zhou J, Dong P, Zhao Y, Wang Q, Li C.

Int J Mol Sci. 2019 Apr 9;20(7). pii: E1754. doi: 10.3390/ijms20071754.

4.

Identification of Populus Small RNAs Responsive to Mutualistic Interactions With Mycorrhizal Fungi, Laccaria bicolor and Rhizophagus irregularis.

Mewalal R, Yin H, Hu R, Jawdy S, Vion P, Tuskan GA, Le Tacon F, Labbé JL, Yang X.

Front Microbiol. 2019 Mar 18;10:515. doi: 10.3389/fmicb.2019.00515. eCollection 2019.

5.

A dynamic degradome landscape on miRNAs and their predicted targets in sugarcane caused by Sporisorium scitamineum stress.

Su Y, Xiao X, Ling H, Huang N, Liu F, Su W, Zhang Y, Xu L, Muhammad K, Que Y.

BMC Genomics. 2019 Jan 18;20(1):57. doi: 10.1186/s12864-018-5400-8.

6.

The Role of UV-B light on Small RNA Activity During Grapevine Berry Development.

Sunitha S, Loyola R, Alcalde JA, Arce-Johnson P, Matus JT, Rock CD.

G3 (Bethesda). 2019 Mar 7;9(3):769-787. doi: 10.1534/g3.118.200805.

7.

Banana sRNAome and degradome identify microRNAs functioning in differential responses to temperature stress.

Zhu H, Zhang Y, Tang R, Qu H, Duan X, Jiang Y.

BMC Genomics. 2019 Jan 10;20(1):33. doi: 10.1186/s12864-018-5395-1.

8.
9.

Transcriptional and Small RNA Responses of the White Mold Fungus Sclerotinia sclerotiorum to Infection by a Virulence-Attenuating Hypovirus.

Lee Marzano SY, Neupane A, Domier L.

Viruses. 2018 Dec 14;10(12). pii: E713. doi: 10.3390/v10120713.

10.

Virus-Derived Small Interfering RNAs Affect the Accumulations of Viral and Host Transcripts in Maize.

Xia Z, Zhao Z, Jiao Z, Xu T, Wu Y, Zhou T, Fan Z.

Viruses. 2018 Nov 23;10(12). pii: E664. doi: 10.3390/v10120664.

11.

MicroRNAs and their targets in cucumber shoot apices in response to temperature and photoperiod.

Zhang X, Lai Y, Zhang W, Ahmad J, Qiu Y, Zhang X, Duan M, Liu T, Song J, Wang H, Li X.

BMC Genomics. 2018 Nov 15;19(1):819. doi: 10.1186/s12864-018-5204-x.

12.

Innate Immunity Activation and RNAi Interplay in Citrus Exocortis Viroid-Tomato Pathosystem.

Thibaut O, Claude B.

Viruses. 2018 Oct 26;10(11). pii: E587. doi: 10.3390/v10110587.

13.

Small RNA and degradome profiling involved in seed development and oil synthesis of Brassica napus.

Wei W, Li G, Jiang X, Wang Y, Ma Z, Niu Z, Wang Z, Geng X.

PLoS One. 2018 Oct 17;13(10):e0204998. doi: 10.1371/journal.pone.0204998. eCollection 2018.

14.

Integrated transcriptome, small RNA and degradome sequencing approaches provide insights into Ascochyta blight resistance in chickpea.

Garg V, Khan AW, Kudapa H, Kale SM, Chitikineni A, Qiwei S, Sharma M, Li C, Zhang B, Xin L, Kishor PBK, Varshney RK.

Plant Biotechnol J. 2019 May;17(5):914-931. doi: 10.1111/pbi.13026. Epub 2018 Dec 1.

15.

Combinations of Small RNA, RNA, and Degradome Sequencing Uncovers the Expression Pattern of microRNA⁻mRNA Pairs Adapting to Drought Stress in Leaf and Root of Dactylis glomerata L.

Ji Y, Chen P, Chen J, Pennerman KK, Liang X, Yan H, Zhou S, Feng G, Wang C, Yin G, Zhang X, Hu Y, Huang L.

Int J Mol Sci. 2018 Oct 11;19(10). pii: E3114. doi: 10.3390/ijms19103114.

16.

Small RNA and degradome sequencing used to elucidate the basis of tolerance to salinity and alkalinity in wheat.

Han H, Wang Q, Wei L, Liang Y, Dai J, Xia G, Liu S.

BMC Plant Biol. 2018 Sep 15;18(1):195. doi: 10.1186/s12870-018-1415-1.

17.

Integrated mRNA, sRNA, and degradome sequencing reveal oilseed rape complex responses to Sclerotinia sclerotiorum (Lib.) infection.

Jian H, Ma J, Wei L, Liu P, Zhang A, Yang B, Li J, Xu X, Liu L.

Sci Rep. 2018 Jul 20;8(1):10987. doi: 10.1038/s41598-018-29365-y.

18.

PAREsnip2: a tool for high-throughput prediction of small RNA targets from degradome sequencing data using configurable targeting rules.

Thody J, Folkes L, Medina-Calzada Z, Xu P, Dalmay T, Moulton V.

Nucleic Acids Res. 2018 Sep 28;46(17):8730-8739. doi: 10.1093/nar/gky609.

19.

Identification of miRNAs and their targets in regulating tuberous root development in radish using small RNA and degradome analyses.

Liu C, Liu X, Xu W, Fu W, Wang F, Gao J, Li Q, Zhang Z, Li J, Wang S.

3 Biotech. 2018 Jul;8(7):311. doi: 10.1007/s13205-018-1330-z. Epub 2018 Jul 10.

PMID:
30003000
20.

A comprehensive review of web-based resources of non-coding RNAs for plant science research.

Liao P, Li S, Cui X, Zheng Y.

Int J Biol Sci. 2018 May 22;14(8):819-832. doi: 10.7150/ijbs.24593. eCollection 2018. Review.

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