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Items: 1 to 20 of 56

1.

WikiGenomes: an open web application for community consumption and curation of gene annotation data in Wikidata.

Putman TE, Lelong S, Burgstaller-Muehlbacher S, Waagmeester A, Diesh C, Dunn N, Munoz-Torres M, Stupp GS, Wu C, Su AI, Good BM.

Database (Oxford). 2017 Jan 1;2017(1). doi: 10.1093/database/bax025.

2.

MicroScope in 2017: an expanding and evolving integrated resource for community expertise of microbial genomes.

Vallenet D, Calteau A, Cruveiller S, Gachet M, Lajus A, Josso A, Mercier J, Renaux A, Rollin J, Rouy Z, Roche D, Scarpelli C, Médigue C.

Nucleic Acids Res. 2017 Jan 4;45(D1):D517-D528. doi: 10.1093/nar/gkw1101. Epub 2016 Nov 29.

3.

Crowdsourcing the nodulation gene network discovery environment.

Li Y, Jackson SA.

BMC Bioinformatics. 2016 May 26;17(1):223. doi: 10.1186/s12859-016-1089-3.

4.

Supporting community annotation and user collaboration in the integrated microbial genomes (IMG) system.

Chen IM, Markowitz VM, Palaniappan K, Szeto E, Chu K, Huang J, Ratner A, Pillay M, Hadjithomas M, Huntemann M, Mikhailova N, Ovchinnikova G, Ivanova NN, Kyrpides NC.

BMC Genomics. 2016 Apr 26;17:307. doi: 10.1186/s12864-016-2629-y.

5.

Centralizing content and distributing labor: a community model for curating the very long tail of microbial genomes.

Putman TE, Burgstaller-Muehlbacher S, Waagmeester A, Wu C, Su AI, Good BM.

Database (Oxford). 2016 Mar 28;2016. pii: baw028. doi: 10.1093/database/baw028. Print 2016.

6.

Wikidata as a semantic framework for the Gene Wiki initiative.

Burgstaller-Muehlbacher S, Waagmeester A, Mitraka E, Turner J, Putman T, Leong J, Naik C, Pavlidis P, Schriml L, Good BM, Su AI.

Database (Oxford). 2016 Mar 17;2016. pii: baw015. doi: 10.1093/database/baw015. Print 2016.

7.

STATdb: a specialised resource for the STATome.

Patro CP, Khan AM, Tan TW, Fu XY.

PLoS One. 2014 Aug 26;9(8):e104597. doi: 10.1371/journal.pone.0104597. eCollection 2014.

8.

The Zebrafish GenomeWiki: a crowdsourcing approach to connect the long tail for zebrafish gene annotation.

Singh M, Bhartiya D, Maini J, Sharma M, Singh AR, Kadarkaraisamy S, Rana R, Sabharwal A, Nanda S, Ramachandran A, Mittal A, Kapoor S, Sehgal P, Asad Z, Kaushik K, Vellarikkal SK, Jagga D, Muthuswami M, Chauhan RK, Leonard E, Priyadarshini R, Halimani M, Malhotra S, Patowary A, Vishwakarma H, Joshi P, Bhardwaj V, Bhaumik A, Bhatt B, Jha A, Kumar A, Budakoti P, Lalwani MK, Meli R, Jalali S, Joshi K, Pal K, Dhiman H, Laddha SV, Jadhav V, Singh N, Pandey V, Sachidanandan C, Ekker SC, Klee EW, Scaria V, Sivasubbu S.

Database (Oxford). 2014 Feb 26;2014:bau011. doi: 10.1093/database/bau011. Print 2014.

9.

Wikis and collaborative writing applications in health care: a scoping review.

Archambault PM, van de Belt TH, Grajales FJ 3rd, Faber MJ, Kuziemsky CE, Gagnon S, Bilodeau A, Rioux S, Nelen WL, Gagnon MP, Turgeon AF, Aubin K, Gold I, Poitras J, Eysenbach G, Kremer JA, Légaré F.

J Med Internet Res. 2013 Oct 8;15(10):e210. doi: 10.2196/jmir.2787. Review.

10.

NeuroLex.org: an online framework for neuroscience knowledge.

Larson SD, Martone ME.

Front Neuroinform. 2013 Aug 30;7:18. doi: 10.3389/fninf.2013.00018. eCollection 2013.

11.

Web Apollo: a web-based genomic annotation editing platform.

Lee E, Helt GA, Reese JT, Munoz-Torres MC, Childers CP, Buels RM, Stein L, Holmes IH, Elsik CG, Lewis SE.

Genome Biol. 2013 Aug 30;14(8):R93. doi: 10.1186/gb-2013-14-8-r93.

12.

Towards the collaborative curation of the registry underlying Identifiers.org.

Juty N, Le Novère N, Hermjakob H, Laibe C.

Database (Oxford). 2013 Apr 12;2013:bat017. doi: 10.1093/database/bat017. Print 2013.

13.

Community intelligence in knowledge curation: an application to managing scientific nomenclature.

Dai L, Xu C, Tian M, Sang J, Zou D, Li A, Liu G, Chen F, Wu J, Xiao J, Wang X, Yu J, Zhang Z.

PLoS One. 2013;8(2):e56961. doi: 10.1371/journal.pone.0056961. Epub 2013 Feb 25.

14.

CircaDB: a database of mammalian circadian gene expression profiles.

Pizarro A, Hayer K, Lahens NF, Hogenesch JB.

Nucleic Acids Res. 2013 Jan;41(Database issue):D1009-13. doi: 10.1093/nar/gks1161. Epub 2012 Nov 24.

15.

BioGPS and MyGene.info: organizing online, gene-centric information.

Wu C, Macleod I, Su AI.

Nucleic Acids Res. 2013 Jan;41(Database issue):D561-5. doi: 10.1093/nar/gks1114. Epub 2012 Nov 21.

16.

Identifying disease mutations in genomic medicine settings: current challenges and how to accelerate progress.

Lyon GJ, Wang K.

Genome Med. 2012 Jul 26;4(7):58. doi: 10.1186/gm359. eCollection 2012. Review.

17.

WikiCell: a unified resource platform for human transcriptomics research.

Zhao D, Wu J, Zhou Y, Gong W, Xiao J, Yu J.

OMICS. 2012 Jun;16(6):357-62. doi: 10.1089/omi.2011.0139.

18.

TP Atlas: integration and dissemination of advances in Targeted Proteins Research Program (TPRP)-structural biology project phase II in Japan.

Iwayanagi T, Miyamoto S, Konno T, Mizutani H, Hirai T, Shigemoto Y, Gojobori T, Sugawara H.

J Struct Funct Genomics. 2012 Sep;13(3):145-54. doi: 10.1007/s10969-012-9139-1. Epub 2012 May 29.

19.

Linking genes to diseases with a SNPedia-Gene Wiki mashup.

Good BM, Clarke EL, Loguercio S, Su AI.

J Biomed Semantics. 2012 Apr 24;3 Suppl 1:S6. doi: 10.1186/2041-1480-3-S1-S6.

20.

A pathologist-in-the-loop IHC antibody test selection using the entropy-based probabilistic method.

Shin D, Arthur G, Caldwell C, Popescu M, Petruc M, Diaz-Arias A, Shyu CR.

J Pathol Inform. 2012;3:1. doi: 10.4103/2153-3539.93393. Epub 2012 Feb 29.

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