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Items: 1 to 20 of 79

1.

Loquacious-PD removes phosphate inhibition of Dicer-2 processing of hairpin RNAs into siRNAs.

Fukunaga R.

Biochem Biophys Res Commun. 2018 Apr 15;498(4):1022-1027. doi: 10.1016/j.bbrc.2018.03.108. Epub 2018 Mar 16.

PMID:
29550490
2.

Rewired RNAi-mediated genome surveillance in house dust mites.

Mondal M, Klimov P, Flynt AS.

PLoS Genet. 2018 Jan 29;14(1):e1007183. doi: 10.1371/journal.pgen.1007183. eCollection 2018 Jan.

3.

The genome of the Hi5 germ cell line from Trichoplusia ni, an agricultural pest and novel model for small RNA biology.

Fu Y, Yang Y, Zhang H, Farley G, Wang J, Quarles KA, Weng Z, Zamore PD.

Elife. 2018 Jan 29;7. pii: e31628. doi: 10.7554/eLife.31628.

4.

The C-terminal dsRNA-binding domain of Drosophila Dicer-2 is crucial for efficient and high-fidelity production of siRNA and loading of siRNA to Argonaute2.

Kandasamy SK, Zhu L, Fukunaga R.

RNA. 2017 Jul;23(7):1139-1153. doi: 10.1261/rna.059915.116. Epub 2017 Apr 17.

PMID:
28416567
5.

Drosophila melanogaster retrotransposon and inverted repeat-derived endogenous siRNAs are differentially processed in distinct cellular locations.

Harrington AW, McKain MR, Michalski D, Bauer KM, Daugherty JM, Steiniger M.

BMC Genomics. 2017 Apr 17;18(1):304. doi: 10.1186/s12864-017-3692-8.

6.

Phylogenetic Origin and Diversification of RNAi Pathway Genes in Insects.

Dowling D, Pauli T, Donath A, Meusemann K, Podsiadlowski L, Petersen M, Peters RS, Mayer C, Liu S, Zhou X, Misof B, Niehuis O.

Genome Biol Evol. 2016 Dec 1;8(12):3784-3793. doi: 10.1093/gbe/evw281.

7.

Phosphate-binding pocket in Dicer-2 PAZ domain for high-fidelity siRNA production.

Kandasamy SK, Fukunaga R.

Proc Natl Acad Sci U S A. 2016 Dec 6;113(49):14031-14036. Epub 2016 Nov 21.

8.

The Smaug RNA-Binding Protein Is Essential for microRNA Synthesis During the Drosophila Maternal-to-zygotic Transition.

Luo H, Li X, Claycomb JM, Lipshitz HD.

G3 (Bethesda). 2016 Sep 2. pii: g3.116.034199. doi: 10.1534/g3.116.034199. [Epub ahead of print]

9.

Multitasking of the piRNA Silencing Machinery: Targeting Transposable Elements and Foreign Genes in the Bdelloid Rotifer Adineta vaga.

Rodriguez F, Arkhipova IR.

Genetics. 2016 May;203(1):255-68. doi: 10.1534/genetics.116.186734. Epub 2016 Mar 26.

11.

Non-Coding RNA: Sequence-Specific Guide for Chromatin Modification and DNA Damage Signaling.

Francia S.

Front Genet. 2015 Nov 13;6:320. doi: 10.3389/fgene.2015.00320. eCollection 2015. Review.

12.

Antisense Transcription of Retrotransposons in Drosophila: An Origin of Endogenous Small Interfering RNA Precursors.

Russo J, Harrington AW, Steiniger M.

Genetics. 2016 Jan;202(1):107-21. doi: 10.1534/genetics.115.177196. Epub 2015 Nov 3.

13.

New Insights into Control of Arbovirus Replication and Spread by Insect RNA Interference Pathways.

Donald CL, Kohl A, Schnettler E.

Insects. 2012 May 29;3(2):511-31. doi: 10.3390/insects3020511. Review.

14.

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Strelets V, Russo SM, Gelbart WM; FlyBase Consortium.

G3 (Bethesda). 2015 Jun 24;5(8):1721-36. doi: 10.1534/g3.115.018929.

15.

Genome-wide view of natural antisense transcripts in Arabidopsis thaliana.

Yuan C, Wang J, Harrison AP, Meng X, Chen D, Chen M.

DNA Res. 2015 Jun;22(3):233-43. doi: 10.1093/dnares/dsv008. Epub 2015 Apr 28.

16.

Adaptive regulation of testis gene expression and control of male fertility by the Drosophila hairpin RNA pathway. [Corrected].

Wen J, Duan H, Bejarano F, Okamura K, Fabian L, Brill JA, Bortolamiol-Becet D, Martin R, Ruby JG, Lai EC.

Mol Cell. 2015 Jan 8;57(1):165-78. doi: 10.1016/j.molcel.2014.11.025. Epub 2014 Dec 24. Erratum in: Mol Cell. 2015 Jun 18;58(6):1133.

17.

A transposable element insertion confers xenobiotic resistance in Drosophila.

Mateo L, Ullastres A, González J.

PLoS Genet. 2014 Aug 14;10(8):e1004560. doi: 10.1371/journal.pgen.1004560. eCollection 2014 Aug.

18.

Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines.

Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC.

Genome Res. 2014 Jul;24(7):1236-50. doi: 10.1101/gr.161554.113.

19.

Diversity and dynamics of the Drosophila transcriptome.

Brown JB, Boley N, Eisman R, May GE, Stoiber MH, Duff MO, Booth BW, Wen J, Park S, Suzuki AM, Wan KH, Yu C, Zhang D, Carlson JW, Cherbas L, Eads BD, Miller D, Mockaitis K, Roberts J, Davis CA, Frise E, Hammonds AS, Olson S, Shenker S, Sturgill D, Samsonova AA, Weiszmann R, Robinson G, Hernandez J, Andrews J, Bickel PJ, Carninci P, Cherbas P, Gingeras TR, Hoskins RA, Kaufman TC, Lai EC, Oliver B, Perrimon N, Graveley BR, Celniker SE.

Nature. 2014 Aug 28;512(7515):393-9.

20.

Cnidarian microRNAs frequently regulate targets by cleavage.

Moran Y, Fredman D, Praher D, Li XZ, Wee LM, Rentzsch F, Zamore PD, Technau U, Seitz H.

Genome Res. 2014 Apr;24(4):651-63. doi: 10.1101/gr.162503.113. Epub 2014 Mar 18.

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